Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01543 ATGGAATCGTCACCGTCGTCCTCGTCTTCGTCCTCGTTGTCGTCGTCTTCTGGAAGCGATGCCGGCGGTGGTGGCGCTGTCACGTGGTTCGGGATGAGTTTCCCGTTCCGTTCTCCGCTTTCTCTCGTGATGGATTACTGCACGCGCGAGGATTCCGCGGAGCCCGTGATTATCATTCCCCGGACGCGCCCGCGGTTTCAGGCGCCGACTGAATCTTCTGCTTCTGTTTCGGCCTCTGACTCTGGCGATAATGCGTGCGGCGGCGCTGAGGAAGTTGCGATACGCATCATCGGGGCCGGCGAGCAAGAGAGCGGTTCGTCGCCGTCGTCATCTAGGAGCCGCGCTGGGGAACAGGGATGTGAGGAGGCGGCGGTGGTTGGGAGGAGCGGGATGCTATCGTCGGAGGCTCGCCGGCGAATGGCTGAGGAGAGGGTGCCGTTGGTGTCTTTGGATGATGAGATTGGTGGCGGTAGGGATTCTTCTTCGTCTTCATCTACCTACCAGAGGTATGATATTCAGCAGGTTGCGAAGTGGATTGAACAGATTCTTCCGTTCTCCCTCTTGCTGTTGATTGTTTTCATCCGCCAGCATTTGCAAGGTACTGCTTCTTTCTGGTGTGTAGTTTGGTCTCTCAAGCTGGTTTTTTTGTTTTAA 654 0.5657 MESSPSSSSSSSLSSSSGSDAGGGGAVTWFGMSFPFRSPLSLVMDYCTREDSAEPVIIIPRTRPRFQAPTESSASVSASDSGDNACGGAEEVAIRIIGAGEQESGSSPSSSRSRAGEQGCEEAAVVGRSGMLSSEARRRMAEERVPLVSLDDEIGGGRDSSSSSSTYQRYDIQQVAKWIEQILPFSLLLLIVFIRQHLQGTASFWCVVWSLKLVFLF 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01543 217 MobiDBLite consensus disorder prediction 99 120 - -
Vimu10g01543 217 MobiDBLite consensus disorder prediction 62 86 - -
Vimu10g01543 217 MobiDBLite consensus disorder prediction 1 22 - -
Vimu10g01543 217 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 67 204 IPR044235 GO:0061630|GO:1904294
Vimu10g01543 217 MobiDBLite consensus disorder prediction 66 82 - -
Vimu10g01543 217 MobiDBLite consensus disorder prediction 102 116 - -
Vimu10g01543 217 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01543 Vimu-Chr10 17127232 17127885 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01543 61 215 C3H Transcription Factor Family AT5G01960 40.252 9.21e-22 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01543 - K22379 gmx:100784614 261.151