Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01519 ATGGAGGGCAGACTCGATGGAAGACTGAGTGTGGTGGAGAACAACATGGAAGCCATGGAGATAGCGGTCGACGAAATAAAGGCTGAAAATGTAGCAGTGCGCCAAGATACGATGGCGATACGGCAAGACTTGCAGGAAGTCATGCGGATTTTGGGAGGAAGGGCGAGTCAAGCGTCTGTAAACGCCAATCGGAGGGCGAGGCGGGAAGACGAGATTGGAGGAAGAGACGGAGAGCGCGGCGAAAGTCACAGCGGGTGGCGAAAGCGGGTAGAATTGCCCCTTTTTGAGGGTTTGGATCCGCTAAATTGGATCAATCGTGCGAAAAAATTTTCAAAGTGCAGGGCGTCTTGGAGGAGGAGAAAGATTCTGGATCAGGGTCTAGAGAACGAAGGCCAGGAACCAATCCTGGGAAGGGTTGAAGGATGCGTTGGTAATGAGGTTTGGGGATCGAAACAGAGGGTCGGTCTTGTTCGTCCTAGAATTCGAGGGTCTGGCGGGGCAGACGAAGGGGTTACCGGAGGAATAACTACTAGAGAGGATATACGAAATCAAGTTCGAATACAAGATTCCCAAGCACTGATGGTCGTCATGCGAATCGCCAGGGAAATGAAGGAAGACTGCATGGGAAATAAGGATGGGTGTAGGCGGAGGAGGTGCGGTGGCGATGTCGAATCAAATCGAAGCAGTGAAGACACGAAACAAAATAGGTGTGCAGAAATGGTGGATGCCAGGAAGAAGATGGCGAAGCTGGACGTGGAGCGGAGTGTGGAAGAGAGGAACTTGTTATCTGTTGGATACAAAAATGTGGTGGGGTCACGAAGAGTTTCATGGAGGATCCTGTCATCGATAGAGCAGAATGAGGAGTCAAAAGGGAATGAGTTGAATGTTAAGGGCATAGGGATTATAGGCACAAGTGCTATTAAGATAATTTTAGATGAGCATCTTATCCCATCCACAAATATTGCGGGGCCCAAGATGTTTTATTATAAGATGAAGGGATATCACACAGCTGCTACCACAGTTGAAAGGGAATTACAACCTACACATTCTATTCGTTTGGGAGATGACTATGATATAGAGAGGAAGAGGTATAGGAGAGAAGGAGAAGAGAACCGAACGGTAGAAGCAAGGACCGAACGGTTATGCTCTCAGGTAACTGACGGAAATCCTGCTCCCAAAGTTGTTCTAGTTACGTTCCATACTCGGATACGTAACAAAGTAACTGGCCAAGAGCACCCAGATACTATTGGGGGAGCGATGACGAATGGATTACGAGAGTCTTTTCGCATAATTGACACATTGAGCACGGGAAATGATTATATTGCATTGGTGAAGGATTTGAGGTGTAGAAGGCTGGAAGTTAATAGAATCCAGGAAGAATGA 1383 0.4765 MEGRLDGRLSVVENNMEAMEIAVDEIKAENVAVRQDTMAIRQDLQEVMRILGGRASQASVNANRRARREDEIGGRDGERGESHSGWRKRVELPLFEGLDPLNWINRAKKFSKCRASWRRRKILDQGLENEGQEPILGRVEGCVGNEVWGSKQRVGLVRPRIRGSGGADEGVTGGITTREDIRNQVRIQDSQALMVVMRIAREMKEDCMGNKDGCRRRRCGGDVESNRSSEDTKQNRCAEMVDARKKMAKLDVERSVEERNLLSVGYKNVVGSRRVSWRILSSIEQNEESKGNELNVKGIGIIGTSAIKIILDEHLIPSTNIAGPKMFYYKMKGYHTAATTVERELQPTHSIRLGDDYDIERKRYRREGEENRTVEARTERLCSQVTDGNPAPKVVLVTFHTRIRNKVTGQEHPDTIGGAMTNGLRESFRIIDTLSTGNDYIALVKDLRCRRLEVNRIQEE 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01519 460 MobiDBLite consensus disorder prediction 63 84 - -
Vimu10g01519 460 PANTHER 14-3-3 PROTEIN 233 333 IPR000308 -
Vimu10g01519 460 SMART 1433_4 222 414 IPR023410 -
Vimu10g01519 460 Pfam 14-3-3 protein 234 333 IPR023410 -
Vimu10g01519 460 Gene3D - 228 335 IPR036815 -
Vimu10g01519 460 MobiDBLite consensus disorder prediction 59 84 - -
Vimu10g01519 460 Coils Coil 9 36 - -
Vimu10g01519 460 SUPERFAMILY 14-3-3 protein 235 354 IPR036815 -
Vimu10g01519 460 ProSitePatterns 14-3-3 proteins signature 1. 259 269 IPR023409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01519 Vimu-Chr10 16776194 16778318 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01519 236 354 14-3-3 family AT1G34760 46.104 6.69e-33 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01519 K06630 - gmx:547574 151.754