Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01455 ATGGAAAACCCAATTTGTGTCGCTGCAAACCATGAAACCTCCTTAATCGCGAATTCAGTGGAGCACGGTGGCAGACGAACTGTGGCGGCGCAACCTTTGACGCAGCGAGAGGAGCGACGAGCAGCGGCGGGGGAGGCGAGCATGCGACAGAGGAGTGAGCATGAGACGGAGGAACGACGAGAAGCGGCGGAGGAGGCGGCACCGTGGACTCCTTGGACGAAGCACCGGAGGCAGCACAGCGGCGACAACAGGGAGGCACCAGCGGAGAAGAAGAAAGCGCGAGAGAGAAAGGAAGAAACCAACACTAGAGAGAAGAACAATTTTCTGAAAATGAAACCTAACAAAGGCTACTACCTCATAAAACCGAGGAAAAAAGCTTTGTTTAAGTCTGCTTTTGTAGATGGAGCAGACGAGATTGGTGAGTGGGTGCAACATGAGAAAAAGGGCTTTGGAAAGGATGATGAGCTCCATAGAAGGCATGGGCTTAGCAGAGACGTTGAAAGTAGCGGCGAGAAAGGACACTTTCTTCACCAAGGAACAATATTGCTTGTTAGGTTAAAGCTTACTTCCTTAGTTGCTTTCTTTGTCGACGGTCTTATGGTGGTTCATGATTATCTTCGACAAACGAGACATGGTAATGGCAAAAGGAATGCAGGCCTCAGCAATTCTAGTAGGTTGCGCATCGCCTTCGGCAAGAGGCACACATTCACTAGTAGGAAACACTTAATCTTTGGCAGGGAGCATGTGACAAAGTTCAAATGCGGAGGTTTTACTTTGGGGCTTTGCATGAACCACTGCATGAAAGATGGACTATGTGCCATGGAGTTTGTGAATGCATGGAGTGAGACAGCTCGAGGTTTAGACATAAAGATCCCACCATTTCTTGATCGAACTATAATCAAAGCACGTGATCCTCCTAAAGTAGAGTTCAAACACAACGAATTTGACGAAATAGAGGATGTGTCAGAGACTAGAAAGCTTTATGAGGAAGAAAACATGCTCTACAGATCCTTCTTCTTCGATCCTGAGAAGCTCGATCTACTTAAGAAAAAGGTCACAGAAGACGGAGTTTTGAGCAAGTGCTCAACTTTTGAAGCGCTCTCAGCGTTTGTGTGGAGAGCTCGAACTGCAGCATTAAGGATGCAACCTGAGCAACAAACAAAGCTTCTCTTTGCAGTTGATGGAAGGTCAAGATTCGTTCCCCCAATACCAAAAGGGTACTTTGGCAATGCTATTGTGTTGACAAATTCGTTGTGTGAGGCTGGGGAGTTATTGAGGAACCCTTTGTCATATTCCGTGGGATTGATTCGCAAGGCAATTGACATGGTCACTGATAGTTACATGAGATCTGCCATTGACTATTTTGAAGTCACAAGAGCTAGGCCATCTCTAACAGCCACCCTTTTGATCACAACTTGGACTAAGTTGTCTTTCCACACCACAGATTTTGGCTGGGGTGAACCTCTATGTTCTGGTCCTGTCACTCTGCCAGAGAAAGAAGTCATTTTGTTTTTATCACATGGTCAAGAAAGGAAAAACGTAAATGTTCTTCTGGGTTTGCCCAAGTCTGCCATGGAAATTTTTGAAGATTTGATGATGCAGGTGTGA 1608 0.4614 MENPICVAANHETSLIANSVEHGGRRTVAAQPLTQREERRAAAGEASMRQRSEHETEERREAAEEAAPWTPWTKHRRQHSGDNREAPAEKKKARERKEETNTREKNNFLKMKPNKGYYLIKPRKKALFKSAFVDGADEIGEWVQHEKKGFGKDDELHRRHGLSRDVESSGEKGHFLHQGTILLVRLKLTSLVAFFVDGLMVVHDYLRQTRHGNGKRNAGLSNSSRLRIAFGKRHTFTSRKHLIFGREHVTKFKCGGFTLGLCMNHCMKDGLCAMEFVNAWSETARGLDIKIPPFLDRTIIKARDPPKVEFKHNEFDEIEDVSETRKLYEEENMLYRSFFFDPEKLDLLKKKVTEDGVLSKCSTFEALSAFVWRARTAALRMQPEQQTKLLFAVDGRSRFVPPIPKGYFGNAIVLTNSLCEAGELLRNPLSYSVGLIRKAIDMVTDSYMRSAIDYFEVTRARPSLTATLLITTWTKLSFHTTDFGWGEPLCSGPVTLPEKEVILFLSHGQERKNVNVLLGLPKSAMEIFEDLMMQV 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01455 535 MobiDBLite consensus disorder prediction 17 106 - -
Vimu10g01455 535 Gene3D - 317 535 IPR023213 -
Vimu10g01455 535 Pfam Transferase family 249 531 - -
Vimu10g01455 535 Gene3D - 180 316 IPR023213 -
Vimu10g01455 535 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 248 530 - -
Vimu10g01455 535 MobiDBLite consensus disorder prediction 38 106 - -
Vimu10g01455 535 FunFam Tryptamine hydroxycinnamoyl transferase 319 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01455 Vimu-Chr10 15736699 15744306 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01455 248 535 Monolignol Biosynthesis Gene Families AT5G48930 37.209 5.33e-63 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01455 K15400 - gmx:100794490 533.487