Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01453 ATGGCCAAAACGGAGATGTCTAGAACTGAACTCAATGTAAAGCAAGGAGAAGCAACGCGAGTTCAGCCTGCAGAGGAAACAGAAAAGGGACCTTACTTCCTTTCAAATCTTGACCAGAACATTGCTGTTCCAGTACGCACGGTGTACTGCTTCAAATCTGCTTTCAGAGGAAACGAGGATGCTGCACAAATTATCAAGGATTCCTTGTCGAAGATTCTTGTCCCTTATTACCCCATGGCAGGCACGCTATCTATAAGCTCGGAAGGGAAGTTGATAGTGCATAATCCTGGGGAGGGTGCATTGTTTGTGGAGGCTGAAGCAAATTGTGACATCGAAGAGATAGGAGACTTGACAAAACCAGACCCTCGTACTCTTGGGAAACTGGTTTACAATGTTCCTGGTGCTCGAAACATTCTTGAGATGCCTCTTATGACTGTTCAGCTCGATAAGGACAACTACTTGGCAAAAAAATTCGTCGTTCAAAACTCTCTCTACCTTTCTCCCAAAATCATGGACAAAGACATGGATATTGTCGACCTTTGCACTCCAGAGATTGGTGATAAATGTGAGACTTTAGTGGTGAACTGGAGTAGGCTTCGATACCGGAGAGGACTATTCAAACTTGAAGATGGCGTATTTGTTCTCCTCAAGGAAGAGGGTCCCTAG 666 0.4474 MAKTEMSRTELNVKQGEATRVQPAEETEKGPYFLSNLDQNIAVPVRTVYCFKSAFRGNEDAAQIIKDSLSKILVPYYPMAGTLSISSEGKLIVHNPGEGALFVEAEANCDIEEIGDLTKPDPRTLGKLVYNVPGARNILEMPLMTVQLDKDNYLAKKFVVQNSLYLSPKIMDKDMDIVDLCTPEIGDKCETLVVNWSRLRYRRGLFKLEDGVFVLLKEEGP 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01453 221 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 20 148 - -
Vimu10g01453 221 MobiDBLite consensus disorder prediction 1 25 - -
Vimu10g01453 221 Pfam Transferase family 13 148 - -
Vimu10g01453 221 Gene3D - 7 215 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01453 Vimu-Chr10 15732652 15735882 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01453 10 148 Monolignol Biosynthesis Gene Families AT5G48930 31.690 1.54e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01453 K15400 - gmx:100794490 245.358