Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01445 ATGGAGAAACACCAAGTTATGCTCCCTACCGCATCTACATCATCAACAGCTGTATCATTTAAACATGTTGAGAAACAGGTTTCAGAGATATCATCTCAGAACCAAAGTGACAAGGAAGCTAAGCACCACCGATATGCATTTCAAACGAGAAGCGCTGTTGATGTTCTGGACGATGGCTACCAGTGGAGAAAATATGGGAAAAAGATAGTCAAAAACAATAGTTTTCCAAGAAGTTACTACAAGTGTGCTCATCGAGAGTGCAATGTTAAGAAACAAATCCAGCGCCACTCCAATGATGAAGAGATCGTGGTGACAACCTACGAAGGGACACATACACACCCTGTGGATAAGTCAGTGGAAACCTTCGACCAGATCTTGGGCAACCTACTCATAGGCAACCTACTCAATAATGGACCTCCCACATTGGAATAG 432 0.4306 MEKHQVMLPTASTSSTAVSFKHVEKQVSEISSQNQSDKEAKHHRYAFQTRSAVDVLDDGYQWRKYGKKIVKNNSFPRSYYKCAHRECNVKKQIQRHSNDEEIVVTTYEGTHTHPVDKSVETFDQILGNLLIGNLLNNGPPTLE 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01445 143 FunFam WRKY transcription factor 57 42 116 - -
Vimu10g01445 143 Gene3D WRKY domain 40 116 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vimu10g01445 143 SMART WRKY_cls 56 115 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vimu10g01445 143 Pfam WRKY DNA -binding domain 57 114 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vimu10g01445 143 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 26 117 IPR044810 GO:0003700
Vimu10g01445 143 ProSiteProfiles WRKY domain profile. 51 116 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vimu10g01445 143 SUPERFAMILY WRKY DNA-binding domain 48 115 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01445 Vimu-Chr10 15543965 15546363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01445 44 131 WRKY Transcription Factor Family AT5G13080 67.045 1.96e-43 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vimu10g01445 WRKY 1.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01445 - - vum:124842421 252.292