Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01301 ATGGCAGAAGTTGGAAAACGCTTCCTTGAGTATCAAGTTATCGTTGATAATCCCAATCCTGTCTGGAACAGTGAAAACTTATTAAGATTCAATCTTCCACAATTTACCCTTCTATTCCTTTGCATGATCGCTCTCACCCGTATTATACACTACATCCTAAGACCTTTCAATCAACCACATTTCGTTGCTGAATTTCTTGCAGGTTTACTGGTATGTCCACAACTGGTGGCAGGAACAATAGCATTTACATTTGTGGCGCCTCCAAAAGCACTTCTTGGTATAGAGACAATGGCACATCTGGGTCTCATCTACAATGTCTTCCTAACTGGCTTGGAGATGAACCTAGACGCTATCCTGCTAGCAAGAAGAAAGGCCACAACCATTGCTATGGTTAGCACCATCATTCCAATGTTGTTAGGAGCTGCAATATATTCTATGGCTCAAGCTCTCTACAAGGGTCCTAACCTTGACATGTCACCTTACAACACACCTAGTGCATATTTATTCTGGGCTTTGGTCCTCAGTGTCACAAACTTCCCTGTCCTTGCTAACATTCTTGCTGATCTTAAGATCCTCTACACAGAGCTAGGTAGAGTGGCTGTAACTGCAGCCACAATAAGCGACTTCTACAATTGGGCAATGTTTGTGTTGCTAATTCCATTTGCTTGTCATAGTCAAAGACCCTTTCTCTCAGTGATATTAACCATTTTCTTTGTGCTCTTCTGCTACTTGGTGTTGCGCCCATTCCTTACCAAGTTGTTGAATAAGGAAACGGAAAATAATGAGTGGGACAATTACAAGTTATCGTATGTTCTTGTAGGTGTTTTGGCTTGTGCACAAGTGACTGAAATGCTAGGTACACATTCCATTGTTGGGGCGTTGATGTATGGATTGATGCTTCCTCGTGGAAAATTTGCTGACATGTTGATGGAAAGGTCAGATGATCTTGTCTCCATGTACCTGGAACCGTTGTTCTTTGTTGGCTGTGGCATAAGATTCGACTTTTCTAGTTTTAAACTGCACAAAGTTCTTAACGTGATCATAATCATTGTCATGTCATGCTTCACTAAGATTGTGAGCACTGTAATAACTGCATGGTTTTATAGAATGCCTTTTCGAGACGGTGTGGCACTTGGAGCACTTTTGAACACCAAAGGCATCTTGCCATTAGTAATGCTAAACATTGCAATTGACAGACAGATTTTGAGTAGGGATTTCTATACAATCATGGTTGTGGCTAGTGTTGTGATGACCATACTAGTGACTCCTACCATCAACTTCATATACAAGCCAAGAAAGCAGTTTAAGAAAAACAAGCTGAGGACTGTACAGAACTTGAAGGCTGATGCAGAGATCAGAATTATGGTCTGCGTTCACAACCCTCGCCATGCTACAGGAATGATGAGCATTCTTGAAGCATGCAGTTGCACCAATGCCACCCATCTACGCGTGTTTGCTCTTCAACTCATTGAGCTGAAAGGACGTGGCACTGCCTTTCTGATAGACGAGGGCGGTGGTTCCAAGCAATCACAAGCAGACACCGAGAGCATCAGAGATATCTTCTCAGAGTTCAAACCAGAACGAGGGCTCACCAACGCTAGCGTGGAGACTCTCGCTGCAGTATCCTCCTACGAGACCATTCACAAGGACATCTACAACATAGCTGACGAGAGACAGACATCCTTGATTCTCCTTCCGTTCCACAAACATTCAAGCGTGGAGGGTGCCCTAGAGGAGACAAACCCTGTGTTCAGAGAGATAAACAGAAATGTGATGCGCTATGCACCATGTTCTGTGGGAATCTTGGTTGACCGTGGACACAGGTTACCGTCTGAGATGAACCTGTATGTTGCCATTGTCTTCATTGGAGGGCATGATGACCGTGAAGCCTTGGCTATTGCTTGGAGAATGGCAAGGCATAAAAGGATCCATCTCTCAATGGTGCATATTCTTCTGTTTGGAAAGGTTGCTGAAGTGGATACAAGTGCAAGAATCAATGATGAAGCCAATGGGATATTGTCCCCTATGTTGGACAGTGCAAGGGAAAAGGAGTTGGATGAGGAGTATATGAGTTTGTTCAGACTCATGGCAGTGAACAATGAGCATTCTGTAACTTATTCAGAGAAGGAAGTGCACACTGCTGATGATATTCCATTGGTTCTTGATGAATTGGAAAGGGAGGGCTATGATTTGTATGTTCTAGGGCATGGAAAAAGAAGGAACTCTACGGTGCTGTCAAAATTGTTAGAATGGACTGATTGTCCTGAACTTGGGGTTATGGGGGACATGCTGGCATCGAATACTTTGGGTTCATGCTCTTCGGTGCTTGTGGTGCAACAATATGCGTTTGGAGGCATGAACTTGAAGTCTATTAACCAAACCACATGTGAAAGCAATCAGGACGACATTGAAGCAATTTCTAAGGTCAAGAGCATCAAATATAATTGGTGA 2451 0.4333 MAEVGKRFLEYQVIVDNPNPVWNSENLLRFNLPQFTLLFLCMIALTRIIHYILRPFNQPHFVAEFLAGLLVCPQLVAGTIAFTFVAPPKALLGIETMAHLGLIYNVFLTGLEMNLDAILLARRKATTIAMVSTIIPMLLGAAIYSMAQALYKGPNLDMSPYNTPSAYLFWALVLSVTNFPVLANILADLKILYTELGRVAVTAATISDFYNWAMFVLLIPFACHSQRPFLSVILTIFFVLFCYLVLRPFLTKLLNKETENNEWDNYKLSYVLVGVLACAQVTEMLGTHSIVGALMYGLMLPRGKFADMLMERSDDLVSMYLEPLFFVGCGIRFDFSSFKLHKVLNVIIIIVMSCFTKIVSTVITAWFYRMPFRDGVALGALLNTKGILPLVMLNIAIDRQILSRDFYTIMVVASVVMTILVTPTINFIYKPRKQFKKNKLRTVQNLKADAEIRIMVCVHNPRHATGMMSILEACSCTNATHLRVFALQLIELKGRGTAFLIDEGGGSKQSQADTESIRDIFSEFKPERGLTNASVETLAAVSSYETIHKDIYNIADERQTSLILLPFHKHSSVEGALEETNPVFREINRNVMRYAPCSVGILVDRGHRLPSEMNLYVAIVFIGGHDDREALAIAWRMARHKRIHLSMVHILLFGKVAEVDTSARINDEANGILSPMLDSAREKELDEEYMSLFRLMAVNNEHSVTYSEKEVHTADDIPLVLDELEREGYDLYVLGHGKRRNSTVLSKLLEWTDCPELGVMGDMLASNTLGSCSSVLVVQQYAFGGMNLKSINQTTCESNQDDIEAISKVKSIKYNW 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01301 816 Gene3D - 34 439 IPR038770 -
Vimu10g01301 816 Gene3D - 452 761 - -
Vimu10g01301 816 Pfam Sodium/hydrogen exchanger family 42 428 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vimu10g01301 816 PANTHER CATION/H + ANTIPORTER 25 781 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01301 Vimu-Chr10 13530448 13533210 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01301 19 781 Antiporter Super Family AT2G13620 36.108 1.50e-172 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01301 - - vum:124819980 1424.45