Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01248 ATGACTTATTGGGCAAATGATAATAATGTTCGAACTGCACTTAATGTCCGCAAGGGAAGTATAGGAACATGGATTCGTTGTAATCAGGATGAAGATTTCAAGTACGATATTCCAAGCAGCGTTGAATATCACGCAAATCTTAGTAAAAAAGGATATCGTTCATTAATATACAAGTTAATTGGCGATCATGACATTTTGGTTCCTTTCTTGGGAACTCAAGAATGGATAAGATCATTAAACTACTCTATTGTTGATGATTGGAGGCCATGGATTTCAAATGGCCAAGTTGCAGGAGCTCCGATTGACAAACCCGGAGAATCTTATGACATGTTCTGTAGATGGATATCTAAGAAGGCTTTGTAG 363 0.3747 MTYWANDNNVRTALNVRKGSIGTWIRCNQDEDFKYDIPSSVEYHANLSKKGYRSLIYKLIGDHDILVPFLGTQEWIRSLNYSIVDDWRPWISNGQVAGAPIDKPGESYDMFCRWISKKAL 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01248 120 SUPERFAMILY alpha/beta-Hydrolases 2 119 IPR029058 -
Vimu10g01248 120 Pfam Serine carboxypeptidase 2 98 IPR001563 GO:0004185|GO:0006508
Vimu10g01248 120 Gene3D alpha/beta hydrolase 1 120 IPR029058 -
Vimu10g01248 120 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 2 94 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01248 Vimu-Chr10 12524158 12525725 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01248 3 120 Calmodulin-binding Proteins AT2G22960 54.015 2.67e-44 140