Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01247 ATGGAAGATGGTCTGGAAGGCGTGGAGAGAGAGCAGCAACGCTTAAGAGATACAAATGTTTTAAATGTGCAAGAAACTCTAGTGAAGTTCCTTCCAGGATTCGAAGGACCCCTTCCTTTTCTTCTTGAAACCGGGTATGTGGGAGTGGGAGAATCAGAGGATGTCCAAACATTTTACTACTTCATTGAGTCAGATAACAATCCCAAGGAAGATCCTCTCATCCTTTGGCTATCCGGTGGCCCTGGTCCACTTGCAATAAAACAGGAGGAGTACAATGGAGGTGCACCCAACTTGATCTTGAGTAATCAATCATGGAACAAGGTTAGTAACATTATATATGTAGACTTGCCTGTTTTCACGGGCTTTACTTATGCCAGAACAGAACTTGCTGCTCAAAGTAGTACTAAGTTGTTAGCTCGTCAAGCCCATGAATTTCTAAAGAAGTGGTTAATTGATCATCCAAAATTTTTGTCAAACGAAGTTTACATTGCTGGTGATTCATATTCTGGCCTTCCCGTTCCAGCAATTGTTCTAGAAATTGCACAAGAGCAAGAGCAACAATGTTGCGGGTTGTTGTATGTGGCTGAGGGAGATAGGGATGACAGAGAAAATGTTGGAGTGAGAGAGATGAAAGAGAAAGGGTTGAGAGGAATGAAGGAGGGATACATTTTGGGGAATCCACTGACAACTAGAAAGGACCGAAACTATGAAATCCCTTTTGCTCATGGAATGGCACTTATTTCTGATGAATTATATGAGTCACTACAAAAAAATTGTAAAGGAAACTACATGGATATGGACTCCGAAGATGTATTATGCTATAAAGATATGGAGTCATTCAATAAGAAACCTCATGGTCGAGCTTTAGAACTCACAGGTCGAGCTCTAGAACCTCGAAACCAAGGTTCCAAACAAATCGGTCCGAAACAGCTCAACCAGCCTAGGTTGGCCAATAAAACTCAGCCAACACAGTTTGGCCAACCCAGCCTGCCAACATAG 999 0.4224 MEDGLEGVEREQQRLRDTNVLNVQETLVKFLPGFEGPLPFLLETGYVGVGESEDVQTFYYFIESDNNPKEDPLILWLSGGPGPLAIKQEEYNGGAPNLILSNQSWNKVSNIIYVDLPVFTGFTYARTELAAQSSTKLLARQAHEFLKKWLIDHPKFLSNEVYIAGDSYSGLPVPAIVLEIAQEQEQQCCGLLYVAEGDRDDRENVGVREMKEKGLRGMKEGYILGNPLTTRKDRNYEIPFAHGMALISDELYESLQKNCKGNYMDMDSEDVLCYKDMESFNKKPHGRALELTGRALEPRNQGSKQIGPKQLNQPRLANKTQPTQFGQPSLPT 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01247 332 Pfam Serine carboxypeptidase 32 284 IPR001563 GO:0004185|GO:0006508
Vimu10g01247 332 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 28 281 IPR001563 GO:0004185|GO:0006508
Vimu10g01247 332 MobiDBLite consensus disorder prediction 292 332 - -
Vimu10g01247 332 Gene3D alpha/beta hydrolase 21 292 IPR029058 -
Vimu10g01247 332 SUPERFAMILY alpha/beta-Hydrolases 28 274 IPR029058 -
Vimu10g01247 332 MobiDBLite consensus disorder prediction 303 332 - -
Vimu10g01247 332 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 124 IPR001563 GO:0004185|GO:0006508
Vimu10g01247 332 PRINTS Carboxypeptidase C serine protease (S10) family signature 101 113 IPR001563 GO:0004185|GO:0006508
Vimu10g01247 332 PRINTS Carboxypeptidase C serine protease (S10) family signature 149 174 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01247 Vimu-Chr10 12506464 12514970 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01247 26 51 Calmodulin-binding Proteins AT2G22960 73.077 1.81e-07 48.9