Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu10g01176 | ATGAGTGTAAAACTCATCTGGGTATTCTTCAATGCCATCTTTTTGTTTCTTCTAGTGGCTAATTCAGAAGAAGAAGGGACGATCAAGGCCCTGGTGACATTCATGGATAAATTGGCACCAGGGTTTGTACCAACAGACCCTTCGTGGGGTTGGAACCTTTCATCAGATCCCTGCATTGATAAGTGGTACGGTGTGAAGTGCCATTCAGATAACAAATATGTTATGAGTGTGACTCTTGAGAAGTTCAATTTTGGAGGAGGTTTTGACGCCGGTTCTCTTTGCATTACAAAGTCTCTTCAAATGCTTAGCCTGAAGGACAACAGTTTACATGATTCGATACCAGAGGATATAGGAAACTGCAAGTCATTGACTCACTTGTTTTTAAGTGGGAACCAATTCTCTGGTGACCTTCCTATTTCTATTGGCAATCTAAGTAACATAATACGGCTTCATATTTCGGACAACCACTTAACTGGAGAGCTACCTAAAATGGTTCATGTTTCAAGTTTGATATCCTTCGTTGCTCAAAACAACAACTTCACTGGGGAGATTCCTAGTTTTGACTTCTCCAACCTTGAAGAGTTTAATGTCTCTAATAACAATTTACATGGTCCAGTTCCTGATGTCGGAGGTAAATTCCATGAAGACAGCTTTACTGGGAATCCTAACTTATGTGGGGAGCCACTTTCAAATGCATGTCCTCCTCCTCCTCCTCCTTCTCCTTCTCCTTCTCCTTCACCATCACCACCACCACATGAAAAGGACAAAAAGTCGTTCCCTAATGATTTGTTCATTTATTCGGGTTACTTAGTCCTTGGTTTGATTACGCTTATTTTCTTGACCTTTAAACTATTATGCAAGTTCAAGACCAAAGAAAAAGTGTTGGATGTTGAAAAGAAGGAAAAGGCAGAAGAAAGTGTTGGTGTTGTTGGCATGGCTGGTGAAATATCCCAATCCAATGGATCAAAGAAGTACATTGGGATCAGATCCGAGTATTCATTGACATCTTTGGAAAGTGGGATGACAACATCAGGTCTTGTTCTTCTTTCAAGTCGAACCCTTAGAGGGTTGCAATTTGAGGACTTGCTTGGTGCTCCTGCCGAATTGATTAGAAGGGGAAAGCACGGAAGCCTCTACAAGGTTATGCTCGATAATGGGGTGCAGTTGGCAGTGAAGAGGATTAAGGATTGGGGGATTTCTAAGCAAGATTTTCAGACAAGGATGAATTTGATAGCCCAAGCCAAGCATCCACGCGTATTGCCACCTGTTGCATACTATTGTTCTCAGCAAGAGAAGCTCCTAGCATATGAATATATGCAGAATGGTAGTCTCTTCATGTTGCTCTATGCTGGATCTGAAAGTGGCCTCATGTTTGACTGGGGAAGAAGACTAAATGTTGCTGCTAAGATAGTTTCGGCTTTGACATATATGCATGAGGAGTTTGTTGATAATGGAATAGCACACGGTAACTTAAAGTCAAATAACATTTTGTTTGACAAGAATATGGATCCATGCATAAGCGAATATGGCCTAATGATGGCAGAAAACTATGGTGAGTTTGTCATTTCGCATAACAAAGGCATCAAAAGCAAAGATCTAATTGCAGCCACCTTCAAAGCTGATGTATATGCCTTGGGTATGATACTTCTGGAGCTGTTGACAGGGAAAGTGATTAAAAATGATGGTTTTGATCTAGTTAAATGGGTGAATTCAGTGGTCAGAGAGGAATGGAGCATTGAAGTTTTTGACAAGTCCCTAATCTCACAGGGTGCTTCGGAAGAGCGGATGATGAATCTGTTGCAGGTAGCATTAAAATGCTTAAATCCTTCTCCACATGACAGGCCAAGTATGAGCCAAGTTGCAGTGATGACAAATGCTTTGATAGAGGAGGAAGAAAAATCCATATCCTTTGACACATGA | 1920 | 0.4109 | MSVKLIWVFFNAIFLFLLVANSEEEGTIKALVTFMDKLAPGFVPTDPSWGWNLSSDPCIDKWYGVKCHSDNKYVMSVTLEKFNFGGGFDAGSLCITKSLQMLSLKDNSLHDSIPEDIGNCKSLTHLFLSGNQFSGDLPISIGNLSNIIRLHISDNHLTGELPKMVHVSSLISFVAQNNNFTGEIPSFDFSNLEEFNVSNNNLHGPVPDVGGKFHEDSFTGNPNLCGEPLSNACPPPPPPSPSPSPSPSPPPHEKDKKSFPNDLFIYSGYLVLGLITLIFLTFKLLCKFKTKEKVLDVEKKEKAEESVGVVGMAGEISQSNGSKKYIGIRSEYSLTSLESGMTTSGLVLLSSRTLRGLQFEDLLGAPAELIRRGKHGSLYKVMLDNGVQLAVKRIKDWGISKQDFQTRMNLIAQAKHPRVLPPVAYYCSQQEKLLAYEYMQNGSLFMLLYAGSESGLMFDWGRRLNVAAKIVSALTYMHEEFVDNGIAHGNLKSNNILFDKNMDPCISEYGLMMAENYGEFVISHNKGIKSKDLIAATFKADVYALGMILLELLTGKVIKNDGFDLVKWVNSVVREEWSIEVFDKSLISQGASEERMMNLLQVALKCLNPSPHDRPSMSQVAVMTNALIEEEEKSISFDT | 639 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu10g01176 | 639 | PANTHER | OS05G0588300 PROTEIN | 8 | 627 | - | - | |
Vimu10g01176 | 639 | Gene3D | Ribonuclease Inhibitor | 28 | 188 | IPR032675 | - | |
Vimu10g01176 | 639 | MobiDBLite | consensus disorder prediction | 224 | 256 | - | - | |
Vimu10g01176 | 639 | SUPERFAMILY | Protein kinase-like (PK-like) | 368 | 622 | IPR011009 | - | |
Vimu10g01176 | 639 | Pfam | Protein kinase domain | 370 | 620 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu10g01176 | 639 | Gene3D | Transferase(Phosphotransferase) domain 1 | 439 | 638 | - | - | |
Vimu10g01176 | 639 | SUPERFAMILY | L domain-like | 44 | 227 | - | - | |
Vimu10g01176 | 639 | FunFam | Leucine-rich repeat receptor protein kinase EMS1 | 91 | 186 | - | - | |
Vimu10g01176 | 639 | Gene3D | Ribonuclease Inhibitor | 189 | 236 | IPR032675 | - | |
Vimu10g01176 | 639 | ProSiteProfiles | Protein kinase domain profile. | 364 | 628 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu10g01176 | 639 | Gene3D | Phosphorylase Kinase; domain 1 | 353 | 438 | - | - | |
Vimu10g01176 | 639 | MobiDBLite | consensus disorder prediction | 229 | 249 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu10g01176 | Vimu-Chr10 | 11522881 | 11525021 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu10g01176 | 48 | 620 | Receptor kinase-like Gene Family | AT1G48480 | 33.389 | 1.55e-93 | 300 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Vimu10g01176 | Pkinase | 1.9e-22 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu10g01176 | - | - | pvu:PHAVU_009G180700g | 1028.08 |