Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01131 AATTGTGAAAAAGTCACTTCAATGGATTTTGCGAACTTCAAACTCTACCTTAACTCGAAGTGGGTATCGACGGTGGCGAGCATATGGATTCAGTGCACCAGCGGCTCACTCTATACTTTCTCCATCTACTCCCAAACTCTCAAGTCCACTCAGCTCTACGATCAGTCAACGCTCGACCTTGTCTCCGTCTTCAAGGACATCGGAGTCAACGCCGGCGTACTCTCTGGCCTCCTCTACGACTTCCTTGCCCGCACAACCACAACCGGGCCCTGGATCGTCCACTTCTTGGGCTCGGCCCAGTGCTTCTTGGGCTATTTCCTGATGTGGGCCGCCGTCGCCGGCCTCTTTCCGCCTGTACCCGTCCCCGTCATGTGCTTCTTCATGTTGGTTACAGCCCACGGGCAGAGTTTCTTCAACACCTCCAACGTTGTCACCGGCGTTCATAATTTCCCTCACAACAGCGGCACCATTGTCGGCATTTTGAAGGGATTTCTTGGTCTAAGTGGAGCAATATTAATTCAAGTGTCCAAAACATTATTCAACAACAATCCTATGTCATACCTTCTGATGCTAGCACTCTTGCCACCTATAAATACTTTGCTGCTTATGTGGTTTGTGAGAATCCACAACACTCGTGAGGATGAAGAAAGGAAGTATTTGAATATATTTTCTGTGATGGCTATGGTTGTTGCTGCCTACCTTATGTTTGTTATAATTCTAGATAACATCTTTAGCCTGCAATCATCGGTGCGCATCTTTATACTTGTTGTTCTTGTGTTGTTGCTTGCCTCACTTCTCTTCATTGCATTTAAAGCACATGAAAAGTGCTCTGGTGAAAGAAGTTTAGAAAATTTTCTGGATGAAAGGGCACAACTAATTGTGGAGCCTGAAAAGGTGGATCCAAGGCCAGATTCTTTGAACAATCAAATGACTAGTTTGCAACTGAATCTTTTCCAAGCAGTGAAAACTGTGAACTTTTGGATTTTGTTTGTTTCTGTTGCTTGTGGTATGGGATCAGGACTTGCAACTGTTAATAATTTGGGGCAAATAGGGGAATCTCTTGGTTACACAAGCCATGAGACAGGTTCCTTGGTTTCTTTGTGGAGCATTTGGAATTTTCTTGGTCGATTTGGAGCAGGTTATGTGTCAGATTATTATTTGCACACAAGAGGATGGGCAAGACCTATATTCATGGTGATAACATTAATGGTGATGAGCATTGGTCATGTGGTGATTGTTTCTGGACTTCCAGGTGCCCTATATGCTGGTTCAATATTGGTGGGTATTTGTTATGGCTCTCAGTGGTCACTAATGCCCACTCTCACTTCTGAGATATTTGGTGTTGTAAATATGGGCAGCATATTCAACACCATTAGTATAGCAAGTCCTGTTGGTTCTTATCTGTTCTCTGTCAGAGTAGTTGGATATATATATGACAGAGAAGCATCTGAAGGAAACACATGCATTGGAACTTCTTGTTTTATGTTTTCATTTCTCATAATGGCATCTGCCACTATTCTGGGTTCTCTAACAGCATTACTTTTGTTTTTTCGGACCAAAGATTTCTATGCTCAGGTTATACTCAGAAGAATTCAAATTATTCAGTGA 1608 0.4303 NCEKVTSMDFANFKLYLNSKWVSTVASIWIQCTSGSLYTFSIYSQTLKSTQLYDQSTLDLVSVFKDIGVNAGVLSGLLYDFLARTTTTGPWIVHFLGSAQCFLGYFLMWAAVAGLFPPVPVPVMCFFMLVTAHGQSFFNTSNVVTGVHNFPHNSGTIVGILKGFLGLSGAILIQVSKTLFNNNPMSYLLMLALLPPINTLLLMWFVRIHNTREDEERKYLNIFSVMAMVVAAYLMFVIILDNIFSLQSSVRIFILVVLVLLLASLLFIAFKAHEKCSGERSLENFLDERAQLIVEPEKVDPRPDSLNNQMTSLQLNLFQAVKTVNFWILFVSVACGMGSGLATVNNLGQIGESLGYTSHETGSLVSLWSIWNFLGRFGAGYVSDYYLHTRGWARPIFMVITLMVMSIGHVVIVSGLPGALYAGSILVGICYGSQWSLMPTLTSEIFGVVNMGSIFNTISIASPVGSYLFSVRVVGYIYDREASEGNTCIGTSCFMFSFLIMASATILGSLTALLLFFRTKDFYAQVILRRIQIIQ 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01131 535 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 21 524 - -
Vimu10g01131 535 Pfam Nodulin-like 20 269 IPR010658 -
Vimu10g01131 535 SUPERFAMILY MFS general substrate transporter 222 521 IPR036259 -
Vimu10g01131 535 Gene3D MFS general substrate transporter like domains 192 507 IPR036259 -
Vimu10g01131 535 SUPERFAMILY MFS general substrate transporter 12 214 IPR036259 -
Vimu10g01131 535 CDD MFS_Mch1p_like 19 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01131 Vimu-Chr10 10857889 10860031 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01131 17 532 Nodulin-like Gene Family AT1G74780 54.699 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01131 - - gmx:100814668 855.129