Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01130 ATGGGGTGGGTGGCGAATCCGTGGACGGCCGTCGCCGCCGCCATCTGGATCCAGTCGAGCTGCGGCGCATCGTACACCTTCAGCATTTACTCCGCCGTGCTGAAGTCAACGCAGGGCTACGACCAATCCACCCTCGATACCGTCTCCGTCTTCAAAGACATCGGCGCTAGCTTCGGCGTCCTATCTGGCCTCCTGTACACCGCCGTCGTTCCCTACACTCATCGCTCTGCCCTCCCCGGCTCCCCGTCCAAGTTCAAATGGACCTCTCTCGCTGGGCCCTGGGTCGTTCTCGCTGCCGGAGCGATCCAGTTCTTCGTGGGCTACCTTTTCATCTGGGCCTCCGTCGTGGGCCTTATAAGCCCGCCCCCCGTGCCCGTCATGAGCTTCTTCGCGTGGCTCGCGGCTAACGGTCAAACCTTCCTGAACACCACCAATGTCGTCACTGGCTTGCGCAATTTCCCTGGGTATAGCGGCACGATCATTGGGATCATGAAGGGCTTTCTCGGACTGAGTGGAGCTATCTTGATCCAAATTTACCATACGTTTTTCGATGGGGAGCCGTCAACGTTCATTTTGATGCTTGCTTTGTTTCCTTCATTGATCTGCGTGTTGTTTATGTTCTTGTTGAGAATTTATGAAGTTTATGGCAGTGATTACAAGAGGCATTTGGATAGTTTCTCTGTGGTTACTGTGATTATTGTTTCCTATCTCGTCTTCATTATAATCTTACAGAACTTGGTTCGTTTGCCATATTGGGGATGGATGTTAGAGTTTGTGATTCTCATGGTTCTGCTAGCATCGCCTTTTGGAATTGCTATCAAGGCCCACTGGGAGGAGTCGCAGAAGTTTTCACAGTCCTACACCATTGAGAGGGGTTCTTCTACAAATAACGGTACTACATCTTCCAGTTATTCTGCATCAGGGGATCAAGTGGAGTACCATGAGTTGCCCAGTGATGAGGGGCAGGCACAAGTGAGTTCAGTTGAGGAATTGCCACATGAAGAAGATAAGAGCCCATTGCAAGCTATATGCACGCTTGAGTTTTGGATGTTGTTTGTGATCATGATATCTGGATTAGGCTCTGGGCTTGCAACTATCAATAATATGAACCAAATAGGACAATCCCTTGGGTATAGTACAATGGAGATTACTAATATGGTATCACTATGGAGTATGTGGAACTTTCTAGGTCGTTTTGGAGGTGGCCATATATCTGATTATATCATGCACAGAAAAGGATGGCCAAGGCCCCTGTTGATGACAGCAACACTGGGGATGATGGTTATTGGGCATTTAATTATAGCATGTGGTTTCCGTGGAAATTTGTATTTGGGTCCTGTTCTAGTGGGCATTGGCTATGGTGCACATTGGTCTTTGATGCCTACAATCACTTCGGAGATATTTGGTGTGAAGCATATGGGTACCATTTTCAATACCATTGCTGCAGCAAGTCCACTTGGATCTTATATACTTTCTGTGAAAGTTGTTGGGTATATTTATGACAAGCAAGCAGATGAAGATAATTTTTGTTTTGGCACAGGCTGTTTCATGTCTTCATATTTTATCCTGGCAGGCGTGACTTTTCTTACACTTTTGGTTGCTTTGGTATTATACTTCCGGACCCAAAGGTTTTATAAACAAGTTGTGCTTAGAAGATTGAAACATTATGCAAGATGA 1677 0.4687 MGWVANPWTAVAAAIWIQSSCGASYTFSIYSAVLKSTQGYDQSTLDTVSVFKDIGASFGVLSGLLYTAVVPYTHRSALPGSPSKFKWTSLAGPWVVLAAGAIQFFVGYLFIWASVVGLISPPPVPVMSFFAWLAANGQTFLNTTNVVTGLRNFPGYSGTIIGIMKGFLGLSGAILIQIYHTFFDGEPSTFILMLALFPSLICVLFMFLLRIYEVYGSDYKRHLDSFSVVTVIIVSYLVFIIILQNLVRLPYWGWMLEFVILMVLLASPFGIAIKAHWEESQKFSQSYTIERGSSTNNGTTSSSYSASGDQVEYHELPSDEGQAQVSSVEELPHEEDKSPLQAICTLEFWMLFVIMISGLGSGLATINNMNQIGQSLGYSTMEITNMVSLWSMWNFLGRFGGGHISDYIMHRKGWPRPLLMTATLGMMVIGHLIIACGFRGNLYLGPVLVGIGYGAHWSLMPTITSEIFGVKHMGTIFNTIAAASPLGSYILSVKVVGYIYDKQADEDNFCFGTGCFMSSYFILAGVTFLTLLVALVLYFRTQRFYKQVVLRRLKHYAR 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01130 558 ProSiteProfiles Major facilitator superfamily (MFS) profile. 346 558 IPR020846 GO:0022857
Vimu10g01130 558 Pfam Major Facilitator Superfamily 351 543 IPR011701 GO:0022857|GO:0055085
Vimu10g01130 558 Pfam Nodulin-like 92 272 IPR010658 -
Vimu10g01130 558 Pfam Nodulin-like 7 68 IPR010658 -
Vimu10g01130 558 CDD MFS_Mch1p_like 7 529 - -
Vimu10g01130 558 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 546 - -
Vimu10g01130 558 Gene3D MFS general substrate transporter like domains 332 555 IPR036259 -
Vimu10g01130 558 SUPERFAMILY MFS general substrate transporter 233 543 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01130 Vimu-Chr10 10842552 10844719 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01130 1 555 Nodulin-like Gene Family AT1G74780 54.676 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01130 - - gmx:100799596 932.169