Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01105 ATGCCGCCTCATTTGTTCACTGGGGGAAAGGTTGAGGGAGAGCAAGGATCTGCAATCCATGTTGTGTTAATGGATCCCAACACTGGCAGTGTGGTTCGTGTTGGACCAGAATCTGTTGCTAAATTGAATGTGGTGGTGCTTGAAGGTGACTTCAATGAGGAAGTGGATGATGATTGGACAAAAGAGCACTTTGAAGGCCATGAAGTAAAGGAGCGTGATGGAAAAAGGCCACTTCTAACTGGAGATTTGCAGGTTAGTCTGAAGGAAGGGGTAGGAACCTTAGGTGAGCTTACTTTTACTGACAATTCTAGCTGGATAAGAAGCAGAAAATTCCGGCTTGGTGTTAAGGTTGCTCCTGGTTATTGTGAGGAGATTCGTATTCGCGAGGGAAAGACCGAAGCCTTTGCTGTTAAAGATCACAGAGGAGAATGTGAGTTTTCTAATACTTCATATTTTTTGCTTATGACTATTCAAACTGTTATGTTTTTGCCGGATGACATGTTCATGGATGTTAACCTTCTGTATCCAGCTAAATACATAATGAACATAGAAAATTTGTCAAGGCAGCAATGTTTTCAGCAACTAAACAACTTGTTTTCTTCAAATTGCAGTATACAAGAAACATTATCCACCTGCTTTGAATGA 645 0.4109 MPPHLFTGGKVEGEQGSAIHVVLMDPNTGSVVRVGPESVAKLNVVVLEGDFNEEVDDDWTKEHFEGHEVKERDGKRPLLTGDLQVSLKEGVGTLGELTFTDNSSWIRSRKFRLGVKVAPGYCEEIRIREGKTEAFAVKDHRGECEFSNTSYFLLMTIQTVMFLPDDMFMDVNLLYPAKYIMNIENLSRQQCFQQLNNLFSSNCSIQETLSTCFE 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01105 214 Pfam Calmodulin binding protein-like N-terminal domain 3 140 IPR046831 -
Vimu10g01105 214 PANTHER OS02G0177800 PROTEIN 2 143 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01105 Vimu-Chr10 10510094 10510738 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01105 1 143 Calmodulin-binding Proteins AT2G24300 79.720 9.25e-76 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01105 - - gmx:100775528 285.034