Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01091 ATGGAGTTCATCAAATGTTCTGTTGCTGGGGTAGCTTATGGTCATGGTGTAACAGAGGTTGAGCAAGTCACCGGAAGAAGTAACGGTTCACCTATTCTTCATGAGCGTATTAATGGTCTAAAATCAAAATCTAATGAAATTGGGGACTCTCCTGATAGAAAAGAGCCTATCAAAGGTTTTAACTTTACAGATGAAAGGATAATGAATGGGAACTGGGTTAATGAGCCTTTTGCTGATTTTTTTCGGTTGTTGGCAATTTGTCATACTGCCATACCAGAAGTGGATGAAGAAACAGGAAATGTCTCATATGAGGCTGAATCTCCAGATGAAGCAGCATTTGTGATTGCTGCAGGTGAAGTTGGTTTTAAATTCTACAAAAGGACCCAGAATTGCTTGTCAATGTATGAGTTGGATCCTGTTTCTGGCAATGAAGTTGAAAGTTTCTCTTGTCGCTTGCTTAGACAAGGAATGAAACAAATTATAATTCATTTGGAGATTCCAGAAATTCAAGCGTTAGAAAAGGTTGGAGAGAAGATGGCTGTTGTGAAGGTAAAATAA 558 0.3853 MEFIKCSVAGVAYGHGVTEVEQVTGRSNGSPILHERINGLKSKSNEIGDSPDRKEPIKGFNFTDERIMNGNWVNEPFADFFRLLAICHTAIPEVDEETGNVSYEAESPDEAAFVIAAGEVGFKFYKRTQNCLSMYELDPVSGNEVESFSCRLLRQGMKQIIIHLEIPEIQALEKVGEKMAVVKVK 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01091 185 Gene3D - 38 158 IPR023299 GO:0000166
Vimu10g01091 185 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01091 Vimu-Chr10 10334387 10342128 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01091 140 183 Primary Pumps ATPases AT1G68710 55.102 6.65e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01091 K01530 - gmx:100798329 266.544