Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01072 GTGATAAACATGGGAAAAGACTCTAAGCCAAAGGAGTCAGGAGGGAAGGGGAAGGGGAAGCAGGCTGCAAGTGGAAGTGATGAGAATGCTTCTAAGGGAAAAGGAAAAGGTGGGAAAGGTGGAGATGGGCTCGGTACTTGCACTTACGTAAAAGCTAGGCATATTTTATGTGAGAAACAAGGTAAGATCAATGAAGCCTACAAGAAGCTGCAAGATGGTTGGCTCGGCAACGGAGATAAGGTCCCGCCAGCTGAGTTTGCAAAGATAGCTCAAGAGTATTCTGAATGTCCTTCGGGAAAGAAGGGTGGAGACCTTGGATGGTTTCCTCGAGGAAAGATGGCCGGGCCATTTCAGGACGTTGCCTTCAGCACACCTGTTGGCGCAACTAGTGCTCCTTTCAAATCAACGCATGGCTACCATATTATCTTAAGTGAAGGAAGAAAGAACTGA 450 0.4756 VINMGKDSKPKESGGKGKGKQAASGSDENASKGKGKGGKGGDGLGTCTYVKARHILCEKQGKINEAYKKLQDGWLGNGDKVPPAEFAKIAQEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFSTPVGATSAPFKSTHGYHIILSEGRKN 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01072 149 Pfam PPIC-type PPIASE domain 50 142 - -
Vimu10g01072 149 Gene3D - 48 147 IPR046357 GO:0003755
Vimu10g01072 149 SUPERFAMILY FKBP-like 48 148 - -
Vimu10g01072 149 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 47 146 IPR000297 GO:0003755
Vimu10g01072 149 PANTHER - 4 149 IPR043323 GO:0003677|GO:0003755|GO:0006364
Vimu10g01072 149 MobiDBLite consensus disorder prediction 1 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01072 Vimu-Chr10 10142551 10143451 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01072 50 145 Sulfurtransferasese or Rhodanese AT5G19370 31.633 4.50e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01072 K09579 - gmx:100801197 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01072 10 10142551 10143451 Vimu10g01072 10 10142551 10143451 ECH