Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu10g01058 | ATGGCCACCGTCACCACCCAAGCCTCCGCCGCAATTTTCCGGCCATGTGCCTCAAAATCTAGGTTTCTGACCGGGTCTTCCGGTAAACTGAACCGGGAAGTGAGTATGAGGCCAATGGGGTGTCCTCCTTCTGCTTCTTTCAAGGTTGAAGCCAAGAAAGGAGAGTGGTTACCAGGCTTGGCCTCCCCAGCTTACCTTAACGGCAGTCTTCCCGGTGACAACGGGTTTGACCCTCTGGGGCTTGCTGAGGATCCAGAGAACTTGAGGTGGTATGTTCAAGCAGAGCTTGTGAATGGACGCTGGGCCATGTTGGGTGTTGCAGGAATGTTGCTTCCTGAGGTTTTCACCAAATTGGGATTCATCAATGCCCCTCAATGGTATGATGCAGGGAAAGCAGAGTACTTTGCTTCATCTTCCACCCTCTTTGTGATTGAGTTCATCCTGTTCCATTATGTGGAGATCAGAAGATGGCAAGACATCAAGAACCCTGGCAGTGTCAACCAAGATCCCATCTTCAAGCAATACAGCTTGCCCCCACACGAGTGTGGTTACCCTGGTAGTGTGTTCAACCCCTTGAACTTTGCACCTACTTTGGAGGCCAAGGAGAAGGAACTTGCCAACGGGAGATTGGCTATGTTGGCATTCTTGGGATTCATAGTTCAACACAACGTGACAGGGAAAGGACCATTTGAGAACCTCTTGCAGCATCTCTCTGACCCATGGCACAACACCATCATCAACACAATTCGTGGCTACTAA | 759 | 0.5033 | MATVTTQASAAIFRPCASKSRFLTGSSGKLNREVSMRPMGCPPSASFKVEAKKGEWLPGLASPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKLGFINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPHECGYPGSVFNPLNFAPTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHLSDPWHNTIINTIRGY | 252 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu10g01058 | 252 | Gene3D | Chlorophyll a/b binding protein domain | 63 | 242 | - | - | |
Vimu10g01058 | 252 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 17 | 248 | IPR001344 | GO:0009765|GO:0016020 | |
Vimu10g01058 | 252 | FunFam | Chlorophyll a-b binding protein, chloroplastic | 63 | 242 | - | - | |
Vimu10g01058 | 252 | SUPERFAMILY | Chlorophyll a-b binding protein | 53 | 249 | - | - | |
Vimu10g01058 | 252 | Pfam | Chlorophyll A-B binding protein | 63 | 222 | IPR022796 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu10g01058 | Vimu-Chr10 | 9870885 | 9871831 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu10g01058 | 43 | 245 | Chloroplast and Mitochondria Gene Families | AT3G61470 | 51.887 | 5.51e-72 | 219 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu10g01058 | K08910 | - | gmx:100798548 | 513.457 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vimu10g01058 | 10 | 9870885 | 9871831 | Vimu10g01058 | 10 | 9870885 | 9871831 | ECH |