Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01058 ATGGCCACCGTCACCACCCAAGCCTCCGCCGCAATTTTCCGGCCATGTGCCTCAAAATCTAGGTTTCTGACCGGGTCTTCCGGTAAACTGAACCGGGAAGTGAGTATGAGGCCAATGGGGTGTCCTCCTTCTGCTTCTTTCAAGGTTGAAGCCAAGAAAGGAGAGTGGTTACCAGGCTTGGCCTCCCCAGCTTACCTTAACGGCAGTCTTCCCGGTGACAACGGGTTTGACCCTCTGGGGCTTGCTGAGGATCCAGAGAACTTGAGGTGGTATGTTCAAGCAGAGCTTGTGAATGGACGCTGGGCCATGTTGGGTGTTGCAGGAATGTTGCTTCCTGAGGTTTTCACCAAATTGGGATTCATCAATGCCCCTCAATGGTATGATGCAGGGAAAGCAGAGTACTTTGCTTCATCTTCCACCCTCTTTGTGATTGAGTTCATCCTGTTCCATTATGTGGAGATCAGAAGATGGCAAGACATCAAGAACCCTGGCAGTGTCAACCAAGATCCCATCTTCAAGCAATACAGCTTGCCCCCACACGAGTGTGGTTACCCTGGTAGTGTGTTCAACCCCTTGAACTTTGCACCTACTTTGGAGGCCAAGGAGAAGGAACTTGCCAACGGGAGATTGGCTATGTTGGCATTCTTGGGATTCATAGTTCAACACAACGTGACAGGGAAAGGACCATTTGAGAACCTCTTGCAGCATCTCTCTGACCCATGGCACAACACCATCATCAACACAATTCGTGGCTACTAA 759 0.5033 MATVTTQASAAIFRPCASKSRFLTGSSGKLNREVSMRPMGCPPSASFKVEAKKGEWLPGLASPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKLGFINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPHECGYPGSVFNPLNFAPTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHLSDPWHNTIINTIRGY 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01058 252 Gene3D Chlorophyll a/b binding protein domain 63 242 - -
Vimu10g01058 252 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 17 248 IPR001344 GO:0009765|GO:0016020
Vimu10g01058 252 FunFam Chlorophyll a-b binding protein, chloroplastic 63 242 - -
Vimu10g01058 252 SUPERFAMILY Chlorophyll a-b binding protein 53 249 - -
Vimu10g01058 252 Pfam Chlorophyll A-B binding protein 63 222 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01058 Vimu-Chr10 9870885 9871831 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01058 43 245 Chloroplast and Mitochondria Gene Families AT3G61470 51.887 5.51e-72 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01058 K08910 - gmx:100798548 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01058 10 9870885 9871831 Vimu10g01058 10 9870885 9871831 ECH