Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01015 ATGGATTCTCTGAAAATGTTCAAAGGTTACGGCAAAATAGAACGCGATCAGCACGGAATCGAAGATCCGCAACCAAACCTTAAATCCCAAATCTCAAAACCCGTAATCTCCACAACAATTTCCGTCTTCGCAATCCTTTCCCTCACTCTAACTCTCGCCTTCGCTATCGCATCCATTGCGCACCACCAAGCCACTGAGTCACAACAGCTTTCCAACTCGGCCGAGTCCATCCGATTTGTCTGCAACGTTACGCGCTTCCCCGCCGCGTGCCTCGCTGCCATCCCGCCTTCCGCTAACGCCACCGATCCCCTCCAGAGCCTCGCGTCCTCGCTCCGCGCAACGAAGGGAGGTGCACTCGCCGACTGCAAGGACCAGTTCGACGACGCGCTGAGTCGACTCAACGACTCGCTGTCGGCCGCAGCGGCGTTGACCGACAAAGCAGTGAGCGACGTGCATACGTGGGTGAGCGCGGCGGTGACGGACCAGCAGACATGCTTGGACGGACTGGAAGAGGCCGGTGACGCGGCGGGCCTTGAGAAGATGAAGAAAATGATGACGAGGTCCGAGGAGTATATGAGTAACAGTTTGGCTATTGTTGCTAATATTCGCGATTTGTTTAGCCATTTCAACATGAAACTCCATTGA 645 0.5488 MDSLKMFKGYGKIERDQHGIEDPQPNLKSQISKPVISTTISVFAILSLTLTLAFAIASIAHHQATESQQLSNSAESIRFVCNVTRFPAACLAAIPPSANATDPLQSLASSLRATKGGALADCKDQFDDALSRLNDSLSAAAALTDKAVSDVHTWVSAAVTDQQTCLDGLEEAGDAAGLEKMKKMMTRSEEYMSNSLAIVANIRDLFSHFNMKLH 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01015 214 CDD PMEI-like_3 80 202 - -
Vimu10g01015 214 PANTHER PECTINESTERASE 50 200 - -
Vimu10g01015 214 FunFam Pectinesterase 104 203 - -
Vimu10g01015 214 NCBIfam pectinesterase inhibitor domain 115 201 IPR006501 GO:0004857
Vimu10g01015 214 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 76 202 IPR035513 -
Vimu10g01015 214 Gene3D Invertase/pectin methylesterase inhibitor family protein 70 203 IPR035513 -
Vimu10g01015 214 SMART PMEI_2 72 198 IPR006501 GO:0004857
Vimu10g01015 214 Pfam Plant invertase/pectin methylesterase inhibitor 80 198 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01015 Vimu-Chr10 9375706 9376392 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01015 1 214 Carbohydrate Esterase AT1G53840 31.250 4.31e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01015 - - gmx:100789567 268.855