Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01014 ATGTCTGGCAGAAGAAAGTCCAGAACTTCAAAATTCAGAGAAAGTGAGATTAATGATCTGTTGTTGATGCTACAAGCACTGTTGCCACAACAAAACCAAACAAGCGACTCAAGGGTATCAGTGAGCATGATGCAGATCATGAAGGAAACTTGCTCTCACATCAGTATGCTTCAGAAAGAGATTAAAGAGCTTGGTGAAAGGGTAGCAGAGTTAGTGAATTCTGCATACACCAGTGATCTTGACTACGAGTGTCTTAGAACACTTCTGCAACATCAACAAAAGAGTTATCTTTTTTTAATACATTTTTTTATAAAAGTACAAATTGATATCAATGTCCTTCATTCTTCAAGCTTTTGGAAATTAAACAAAGATTTGAGATAG 381 0.3596 MSGRRKSRTSKFRESEINDLLLMLQALLPQQNQTSDSRVSVSMMQIMKETCSHISMLQKEIKELGERVAELVNSAYTSDLDYECLRTLLQHQQKSYLFLIHFFIKVQIDINVLHSSSFWKLNKDLR 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01014 126 Gene3D - 4 85 IPR036638 GO:0046983
Vimu10g01014 126 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 57 IPR011598 GO:0046983
Vimu10g01014 126 PANTHER DNA BINDING PROTEIN 1 90 IPR044172 -
Vimu10g01014 126 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 8 62 IPR036638 GO:0046983
Vimu10g01014 126 Coils Coil 54 74 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01014 14 78 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G74500 40.299 1.06e-09 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01014 - K20899 pvu:PHAVU_009G188800g 129.413