Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00971 ATGTCTCCGTTCATGGTTGTCTTCGCAACAATCGCAGCAGCGATCCTCGTATGTCGTTTAATAAACTTCTTAAGGCGTTCTTATTCTCTGCCACTCCCTCCAGGCCCAAAACCCTGGCCCGTTCTCGGGAATTTCCCACACATGGGCCCAGTGCCTCACCACTCCCTCGCCGCCTTGGCCCGCGTTCACGGCCCCTTGATGCACCTGCGGCTCGGATTCGTCGACGTCGTCGTGGCGGCGTCCGCGTCGGTTGCCGAACAGTTTTTGAAGATTCATGACTCTAATTTCAGCAGCCGGCCACCCAACGCCGGTGCCAAATACATAGCCTATAACTACCAGGACCTGGTGTTCGCCCCCTACGGCCCGCGGTGGCGGTTGCTCCGGAAACTCACCTCCGTTCACCTCTTCTCCGGGAAGGCCCTCGATGTATTTAGACACTTGCGTGAGGAAGAGGTGGGAAGACTTACACGTAACCTGGGAAGTTCAGAGGGAAAAGCGGTGAATTTAGGGCAAGTGTTGAACGTGTGCACCACGAACGCATTAGCGAGGGTGATGATCGGACGGCGAGTGTTCGACGACGGGAACGGCGGGTGCGATTCTCGGGCTGACGAGTTCAAGAACATGGTGGTGGAGGTGATGATGTTGGCCGGCGTTTTGAACATCGGCGACTTTATTCCGTCGCTGGAGTGGCTTGATCTTCAAGGAGTGCAAGCTAAGATGAAGAAATTGCATCAGAGATTTGATGCATTTTTGAGTACCATTATTGAAGAACACGATTCTTCTTCCAACAATCTCTTGAGTATCTTATTGTCTCTTCAAGATGCGAAGGACGATGACGGAAACCATCTTACTCACACAGATATCAAAGCATTGCTGCTGAATATGTTTACAGCTGGAACCGACACGTCATTGAGCACAATAGAATGGGCCATCGCTGAACTGATCCGAAATCCAAGAATCCTGACCCAAGTCCAGCAAGAGTTGGACACTGTTGTGGGCCGAGACAGGAGCGTCAAAGAAGAGGACTTGGCCCATCTCTCGTACCTACAAGCTGTGATCAAGGAAACCTTCAGGCTCCACCCATCAACCCCTCTTTCTCTGCCACGTGTCGCTGCCGAGAGCTGCGAGATATTTGGGTACCACATTCCCAAGGGTTCGACTCTCTTGGTGAATGTTTGGGCCATAGCCCGTGATCCGAAGGAATGGGCCGACCCGTTGGAGTTCAGGCCCGAGAGGTTCCTTCCCGGTGGTGAGAAGGCTGATGTTGACGTTAAGGGCAATGACTTTGAGGTTATACCATTCGGTGCTGGAAGAAGGATTTGCGCTGGGCTCAGCCTTGGGCTTCGAATGGTCCAACTTCTAACTGCAACCTTGGCCCATTCTTTTGATTGGGAATTGGAAAATGGGCTGAACCCTGAAAAGATGAACATGGATGAAGCCTCTGGGCTTTCCCTGCATCGGGCCGAGCCTCTTTCAGTAGTTCCCAGGCCCAGGCTCGCACAACATGTTTACTCAATGTTTTCATAA 1527 0.5239 MSPFMVVFATIAAAILVCRLINFLRRSYSLPLPPGPKPWPVLGNFPHMGPVPHHSLAALARVHGPLMHLRLGFVDVVVAASASVAEQFLKIHDSNFSSRPPNAGAKYIAYNYQDLVFAPYGPRWRLLRKLTSVHLFSGKALDVFRHLREEEVGRLTRNLGSSEGKAVNLGQVLNVCTTNALARVMIGRRVFDDGNGGCDSRADEFKNMVVEVMMLAGVLNIGDFIPSLEWLDLQGVQAKMKKLHQRFDAFLSTIIEEHDSSSNNLLSILLSLQDAKDDDGNHLTHTDIKALLLNMFTAGTDTSLSTIEWAIAELIRNPRILTQVQQELDTVVGRDRSVKEEDLAHLSYLQAVIKETFRLHPSTPLSLPRVAAESCEIFGYHIPKGSTLLVNVWAIARDPKEWADPLEFRPERFLPGGEKADVDVKGNDFEVIPFGAGRRICAGLSLGLRMVQLLTATLAHSFDWELENGLNPEKMNMDEASGLSLHRAEPLSVVPRPRLAQHVYSMFS 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00971 508 Gene3D Cytochrome P450 25 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00971 508 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00971 508 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00971 508 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00971 508 FunFam Red aleurone1 24 496 - -
Vimu10g00971 508 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00971 508 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00971 508 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00971 508 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00971 508 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00971 508 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00971 508 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00971 508 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00971 508 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00971 508 Pfam Cytochrome P450 33 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00971 508 SUPERFAMILY Cytochrome P450 33 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00971 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Vimu10g00971 508 PANTHER CYTOCHROME P450 98A9 7 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00971 Vimu-Chr10 8770031 8776668 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00971 6 508 Cytochrome P450 AT5G07990 66.082 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00971 K05280 - gmx:547475 845.884