Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00851 ATGATTATATTTGATAAAGGTTCGACATTCCTGGTTTGGTTTGGACCCACCGTTCGAGTCACCATCTCTGATCCAGACCTCATCCGAGAAATCTTGATCTCCAAGTCAGAATTCTATGAGAAAAACGAATCTCCCCCACTTGTCAAGCAGCTTGAAGGTGATGGACTCCTGAGCCTCAAAGGAGAAAAATGGGCTCACCACCGAAGAATCATCTCTCCCACCTTTCGCATGGAGAATCTCAAATTGTTGATACCGAATATGGCAACAAGCGTGGTAGAGATGTTAGAGAAGTGGAAGACAATGGGGGGCGAGAAGGGTGAAGTGGAAATCGAAGTTTCAGAATGTTTTCAAACCTTAACAGAAGATGTAATAACAAGGACAGCGTTTGGAAGCAGCTACGAAGACGGGAAAGCCGTTTTCCGGTTACAAGCCCAACAAATGGAACTGGCAGCGGATGCCTTCCAAAAAGTGTTCATTCCAGGTTCCAGATTCTTTCCGACAAGGAGGAATTTAAATTCTTGGAAATTGGATAAGAAAATGAAGAGATCGTTGGTGAAGTTGATCGATCGACGAAAAGAGAATGCGTGTGAGAATGAAATTAGAAAAGGAGCGAAGGATTTGCTGGAGCTTATGATTGGAGCTTCCGTAAAGGTTGATGACATGGTGGAAGAGTGCAAGACATTTTTCTTTGCAGGGAAACACACCACTTCGAATCTGCTGACGTGGAGCACTATTCTGCTTGCTATGCATCCGAAGTGGCAGGTAGAGGCACGTGAGGAGGTGGCGATGGTGTGCGGTGCACGTGGCATCCCTACCAAGGACGATCTCTTCAAGCTTAAGACATTGACGATGATCGTCAACGAGTCTCTAAGGCTCTACCCTCCGACCATCGCAACCATCAGAAGGGCCAAAGCTGACGTGGAGCTAGGGAAGTTGAAGATCCCGTGCGGGACGGAGCTCCTCATCCCCATCTTGGCCGTTCATCACGATCAGGCCACGTGGGGCAGCGACGCCAACGAGTTCAATCCTGCCCGTTTCTCCAACGGCGTGTCTGGCGCTGCGCGCCACCCTTTTGCATTCATCCCCTTCGGGCTCGGTGCGCGAACCTGCGTGGGACAGAACCTGGCGCTTCTTCAAACGAAACTGACCCTTGCCATCATGCTTAGCCGTTTCAGTTTCAAATTGGCCCTTACCTATCGCCACGCGCCAACGGTCCTGATGTTGCTCTACCCTCAGTATGGCGCGCCGATCATTTTCCAACCCATTGCCACAAGCGCAACCACCGTGGATTGTTGA 1296 0.4969 MIIFDKGSTFLVWFGPTVRVTISDPDLIREILISKSEFYEKNESPPLVKQLEGDGLLSLKGEKWAHHRRIISPTFRMENLKLLIPNMATSVVEMLEKWKTMGGEKGEVEIEVSECFQTLTEDVITRTAFGSSYEDGKAVFRLQAQQMELAADAFQKVFIPGSRFFPTRRNLNSWKLDKKMKRSLVKLIDRRKENACENEIRKGAKDLLELMIGASVKVDDMVEECKTFFFAGKHTTSNLLTWSTILLAMHPKWQVEAREEVAMVCGARGIPTKDDLFKLKTLTMIVNESLRLYPPTIATIRRAKADVELGKLKIPCGTELLIPILAVHHDQATWGSDANEFNPARFSNGVSGAARHPFAFIPFGLGARTCVGQNLALLQTKLTLAIMLSRFSFKLALTYRHAPTVLMLLYPQYGAPIIFQPIATSATTVDC 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00851 431 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 363 372 IPR017972 GO:0005506|GO:0016705
Vimu10g00851 431 Gene3D Cytochrome P450 5 422 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00851 431 FunFam Cytochrome P450 734A1 3 423 - -
Vimu10g00851 431 SUPERFAMILY Cytochrome P450 7 421 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00851 431 PRINTS E-class P450 group I signature 240 266 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00851 431 PRINTS E-class P450 group I signature 360 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00851 431 PRINTS E-class P450 group I signature 27 48 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00851 431 PRINTS E-class P450 group I signature 119 137 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00851 431 PRINTS E-class P450 group I signature 220 237 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00851 431 PRINTS E-class P450 group I signature 370 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00851 431 PRINTS P450 superfamily signature 231 248 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00851 431 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00851 431 PRINTS P450 superfamily signature 284 295 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00851 431 PRINTS P450 superfamily signature 361 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00851 431 PANTHER CYTOCHROME P450 FAMILY MEMBER 12 415 - -
Vimu10g00851 431 Pfam Cytochrome P450 7 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00851 Vimu-Chr10 7549388 7551235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00851 7 420 Cytochrome P450 AT2G26710 72.792 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00851 K15639 - gmx:100786200 707.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00851 10 7549388 7551235 Vimu7g00980 7 9650899 9653035 PCT