Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00842 ATGGGAACCTCTGCAAACGCCGCTCCCGGTGGTCGAGGCGCCCCTGTTCCCAAAGACGTTGACTTTGCCAATTACTTCTGCACCTATGCTTTCCTCTACCACCAGAAGGATATGCTCTCCGATCGTGTTCGCATGGACGCTTACTTCAACGCCATCTTCGAGAACAAAAAACACTACGCTGGCAAGACTGTTTTGGATGTGGGGACTGGAAGTGGCATTCTTGCTATATGGTCAGCACAAGCAGGTGCGAAGAAGGTGTATGCAGTGGAAGCGACCAAGATGTCAGAACATGCCCGTGCACTCGTCAAAGCTAATAATCTCCAGAATGTAGTTGAGGTCATCGAGGGATCAATGGAGGATGTTACCTTGCCTGAGAAAGTTGACGTGATCATCTCTGAGTGGATGGGTTATTTTCTTCTGCGAGAATCCATGTTTGATTCAGTTATACATGCTCGTGACCACTGGCTCAAACCGACAGGAGTGATGTATCCTAGTCATGCTCGCATGTGGATGGCACCCATCAGGACTGGGATAGTTGATCACAAATTAGGAGAATATGAATCAACTATGGATGATTGGAACAACTTCGTTGATGAAACAAAAACCTACTATGGATTGCATGCTGGACACCTAGAGTATAAAGGGGGGTCGACATCTTTGTGGAACAACCTTCATCCACATCAAGTCATTGGAACTGCTGCTATAATAAAGGAAATTGATTGTTTAACTGCCACAGTGGCTGACATAGAAAAAGTTAGATCAAACTTTTCTTTGTCAATAACCATGGAAACTGCAAAGTTGTGTGGATTTGGTGGGTGGTTTGATGTACATTTTCGGGGAAGAAGTGAGGATCCAGCTAAACAGGAGATTGAGTTAACTACAGCTCCCAGTGTGGATTACGGTACACATTGGGGCCAACAGGTTTTTCTTTTGCATCCTCCTATGAATCTCAGTGAAGGTGATGATTTAAAGGTTTCTTTTCTGATGAGTCGCTCAAAGGCGAATCATCGTTTGATGGAGGTTGAACTTGGGTGGACTACAGGATACATGGCAGATTCTATTGCTCTTGATGCTTTGAATGATGATATCATATAA 1095 0.4457 MGTSANAAPGGRGAPVPKDVDFANYFCTYAFLYHQKDMLSDRVRMDAYFNAIFENKKHYAGKTVLDVGTGSGILAIWSAQAGAKKVYAVEATKMSEHARALVKANNLQNVVEVIEGSMEDVTLPEKVDVIISEWMGYFLLRESMFDSVIHARDHWLKPTGVMYPSHARMWMAPIRTGIVDHKLGEYESTMDDWNNFVDETKTYYGLHAGHLEYKGGSTSLWNNLHPHQVIGTAAIIKEIDCLTATVADIEKVRSNFSLSITMETAKLCGFGGWFDVHFRGRSEDPAKQEIELTTAPSVDYGTHWGQQVFLLHPPMNLSEGDDLKVSFLMSRSKANHRLMEVELGWTTGYMADSIALDALNDDII 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00842 364 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 23 346 IPR025799 GO:0016274|GO:0018216
Vimu10g00842 364 FunFam Protein arginine N-methyltransferase PRMT10 19 164 - -
Vimu10g00842 364 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 29 348 IPR029063 -
Vimu10g00842 364 Gene3D Vaccinia Virus protein VP39 20 164 IPR029063 -
Vimu10g00842 364 FunFam Protein arginine N-methyltransferase PRMT10 166 355 - -
Vimu10g00842 364 CDD AdoMet_MTases 63 163 - -
Vimu10g00842 364 Pfam Ribosomal protein L11 methyltransferase (PrmA) 59 133 - -
Vimu10g00842 364 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 19 342 IPR025799 GO:0016274|GO:0018216
Vimu10g00842 364 Gene3D - 166 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00842 Vimu-Chr10 7504814 7508656 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00842 24 318 C2H2 Transcription Factor Family AT3G12270 31.250 2.08e-37 140