Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00818 ATGGAGGAACATAAACCTGTTATCTCCACTTGTGAACAAGATCAACACGTGGTTGCTGCTGCTCAACACATTTTAAAGGCACTAGCAGCCAGTAAGAATGTGTCCAGTGACTTGAGAAAAACCCTCTTGGATGTTGAGTCCCAATTGTCCGCAATTTCCATAGTCAATGAGAGGAAAGGAAGGGGTATCAAGCCATTAGAGAACCGGCTCAAGTGTGTTGAAGACAAGGTAACGAGGTGGATAGCAAACCCTTCCATGACATGGGACTCTAGTCCCAATCAGTCTTCAGACTATTTGAAAGTTGTAGGTGAAATCCAAACACTGATTCAGAGTTTGGAAAGCTTTTCTGTGGTGAATGATAATTGGAGGCAGAAGGAACTTCTTGAGAGAGCATATGCAGTTTTGCAGGATGCTATGTCCAGGCTTGAGAGAGAATTAGACCACATTCTTGTTGAACATAAGCAGTACTTTGAGCCTGAATACATGTCTTTCGATTCTAAAATGGATATGGCATATGATGAATCATTTCGTGAAGTGGAGGATGAACAAGTTAACGAGGTCAGCAGGAGTACCGGTTCTAGCCAATCCGAGGCCAACATTGTTGATCTGATGAATCCAGCAGTACTTGAGTATCTCAAGAGCATTGCAAATGTTATGTTTGACTCAAAATACCATCAGGAGTTCTGTCAGGTCTTCATTTCATCCAGAAAGGATGCCTTGGCTGAGTATTTTGTTATTCTTAAGATGGAAAAATTAAGCATTGAGGATGTGCTGAAACTGGAGTGGCAGTGCTTGAACCATGAGATGAAGAAATGGATACGAGCTATGAAGATCATTGTTCAGGTGTATCTTGTCAGTGAGAAAAGATTGTGCAAACACATCCTTGGGGACTTTGGATCCTTTTATCAGTGTTGCTTTTCTGAAATTTCTCAGAGTTTTATGCTTCTCCTTTTGAATTTTGGAGAGGCCGTGGCAATGGGAACACACACCCCAGAAAGAATATTTCGTTTGCTTGATATGCATGAGGTTTTGGAGCATATTTCAGTGGATGTAGATAAATTGTTCTTTGAAGAAGTTGGTGCTTTTGTCAGAGGAGAGTTTCACAAGCTTCTAACGAGCATTGGTGACACTATTAAGTCTACATTTCTGGCATTCAGAAATGCTATTGCAACTAACCATTCAAAGACTCCTTTTCCTCAAGGGGGTGTTCACCATGTTACCAAGTATGTGATGAATTACATCACGACACTAGTTGAATATGGTGACACCCTTAATCTCCTTCTTGCTGAAGAATGTTCAACTGATCCTGCAGTCTATAAACAAGAAACATCAGCTCTCTCACTGTGTCCAGTGGCCTTCTACTTTCGGTCAATCACCACAGCTCTAGAATCCAACTTGAGCAACAAGTCCAAACTATACAAAGATGTAGCTTTGCAACATATTTTCATGATGAACAACATTCGTTACATGGTGCAAAAGGTGAAGTGCTCTGATCTAAGCCACTTTTTTGGAGACTGCTGGCTTCGGCAGCACACTGCTGAGTATCAGCGCGATGCAAGGTGTTATGAGAGAGTGACTTGGGGTCCAATACTTTCTATGCTTAAGGATGATAATTTGCCAAATTGTGTTTCACCCAGAACTTTGGAGAAAAGCTGCAAAAAGTTTTGCAATGCGTTTCGTGAAGTGTACAGGACCCAGACGGGGTGGTGTATCCAAGACTCTCAACTTCGTGAGGATCTACAAATTTCTGTGTCTCAGAAAGTGGTTCTTGCATACGGATCATACACTGGAAGAAACTCATTAAACATTGCAGATAAGTATATCAAGTACACTGTTGAGGATCTACAAAGTTATATTTTGGACCTTTTTCAAGGGTCGCCAAAATCTTTGCACTACACTCAGCAAAGAAATTGA 1914 0.4122 MEEHKPVISTCEQDQHVVAAAQHILKALAASKNVSSDLRKTLLDVESQLSAISIVNERKGRGIKPLENRLKCVEDKVTRWIANPSMTWDSSPNQSSDYLKVVGEIQTLIQSLESFSVVNDNWRQKELLERAYAVLQDAMSRLERELDHILVEHKQYFEPEYMSFDSKMDMAYDESFREVEDEQVNEVSRSTGSSQSEANIVDLMNPAVLEYLKSIANVMFDSKYHQEFCQVFISSRKDALAEYFVILKMEKLSIEDVLKLEWQCLNHEMKKWIRAMKIIVQVYLVSEKRLCKHILGDFGSFYQCCFSEISQSFMLLLLNFGEAVAMGTHTPERIFRLLDMHEVLEHISVDVDKLFFEEVGAFVRGEFHKLLTSIGDTIKSTFLAFRNAIATNHSKTPFPQGGVHHVTKYVMNYITTLVEYGDTLNLLLAEECSTDPAVYKQETSALSLCPVAFYFRSITTALESNLSNKSKLYKDVALQHIFMMNNIRYMVQKVKCSDLSHFFGDCWLRQHTAEYQRDARCYERVTWGPILSMLKDDNLPNCVSPRTLEKSCKKFCNAFREVYRTQTGWCIQDSQLREDLQISVSQKVVLAYGSYTGRNSLNIADKYIKYTVEDLQSYILDLFQGSPKSLHYTQQRN 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00818 637 Gene3D Exocyst complex component Exo70 84 632 - -
Vimu10g00818 637 PANTHER EXOCYST COMPLEX PROTEIN EXO70 64 625 IPR004140 GO:0000145|GO:0006887
Vimu10g00818 637 SUPERFAMILY Cullin repeat-like 89 623 IPR016159 -
Vimu10g00818 637 Pfam Exo70 exocyst complex subunit 270 620 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vimu10g00818 637 Coils Coil 125 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00818 Vimu-Chr10 7242151 7244064 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00818 1 624 EXO70 exocyst subunit family AT5G61010 42.222 1.16e-171 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00818 K07195 - gmx:100791622 992.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00818 10 7242151 7244064 Vimu10g00818 10 7242151 7244064 ECH