Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00799 ATGGAATCTGACAGTGGTAAACAGCAGCAAAAGGACACATTTGGATGCTTCAAGTTGGTTGCCTTAATTGCTCTATGCTTTGTTTTAGTTTCTCCAGCAGAATCATTTGATCCATTGGATCCAACTGGGAATGTGACAATAAGATGGGATATCATGTCCTGGACATCAGATGGATATTTGGCCACTGTGACATTGTTTAACTTTCAATTGTACCGCAATATTATGAATCCTGGGTGGACTCTGGGGTGGACATGGGCAAAGAAAGAAATAATCTGGGCCATGATGGGGGCTCAAGCCACAGAGCAAGGAAACTGTGCCAAGTTCAAGTTGAAGATTCCTCACAGCTGCAAGAGGGACCCTCAAGTGGTTGACTTGCTACCAGGAGCTCCTTTCAACATGCAGTTCACCAATTGCTGCAGGGGTGGTGTGCTTACATCTTGGGGACAGAATCCTTCAGGTGCAGTCTCTTCATTTCAGATAGGTGTGGGGCTCTCTGGCACCTCCAACAAGACAGTCAAATTGCCTAAGAACTTCAAATTGTTGGGACCTGGACCAGGATATTCTTGTGGCCCTGCTAAGGTTGTTCCATCCACTGCAATCCTCACAGATGATCGAAGGCGAAAAATGCAGGCATTGATGTCTTGGAATGTGACATGCACTTATTCACAGTTTCTTGCCTCCAAGAACCCAAGCTGTTGTGTTTCTTTGTCATCTTTCTACAGTGACAAAATCACAGGTTGTCCACCTTGTGCTTGTGGTTGCCAGAATAACGATACCTGTGTCACGAAAGACTCAAAGATCCTGCAAGAGAACGTCACCTCAACTCATCGAAAATCAGACATCACACCAAAACCATTGTTACAATGCACACACCACCTGTGTCATGTCCGGGTGCACTGGCATTTGAAAGACAACTATCAGGACTATTGGCGTGTCAAGATTGCCATTATCAACTTCAACTATCGATTGAATTTCACCGATTGGTCTCTTGTTGTGCAGCACCCCAATCTCAATAATGTAACCCAAGTCTATAGCTTTGAATACATGCCACTCCTTCCCTATGAATCCATAAATGACACAGGCATGTTCTATGGTTTAAAATATTACAATGATCTGTTGATGGAAGCTGGGCCTAAAGGGAATGTTCAGTCTGAGGTGCTCATGAAGAAGGACAAGAACACATTTACTCTCAAGCAGGGTTGGGCATTTCCTAGGAGGGTCTACTTTAATGGTGATGAATGCATGCTGCCACCTCCTGATTCATATCCTATGTTGCCAAACTCTGCCCACAAACCACCACCAACTATTACATTCATTACAACCTATGTGCTTAGAGAGAGGAGTTAG 1347 0.4432 MESDSGKQQQKDTFGCFKLVALIALCFVLVSPAESFDPLDPTGNVTIRWDIMSWTSDGYLATVTLFNFQLYRNIMNPGWTLGWTWAKKEIIWAMMGAQATEQGNCAKFKLKIPHSCKRDPQVVDLLPGAPFNMQFTNCCRGGVLTSWGQNPSGAVSSFQIGVGLSGTSNKTVKLPKNFKLLGPGPGYSCGPAKVVPSTAILTDDRRRKMQALMSWNVTCTYSQFLASKNPSCCVSLSSFYSDKITGCPPCACGCQNNDTCVTKDSKILQENVTSTHRKSDITPKPLLQCTHHLCHVRVHWHLKDNYQDYWRVKIAIINFNYRLNFTDWSLVVQHPNLNNVTQVYSFEYMPLLPYESINDTGMFYGLKYYNDLLMEAGPKGNVQSEVLMKKDKNTFTLKQGWAFPRRVYFNGDECMLPPPDSYPMLPNSAHKPPPTITFITTYVLRERS 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00799 448 PIRSF COBRA 8 446 IPR006918 GO:0010215|GO:0016020
Vimu10g00799 448 PANTHER PROTEIN COBRA 23 440 IPR006918 GO:0010215|GO:0016020
Vimu10g00799 448 Pfam COBRA-like protein 59 222 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00799 Vimu-Chr10 7072266 7074571 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00799 47 431 COBRA Gene Family AT5G60920 62.982 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00799 - - gmx:100813134 895.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00799 10 7072266 7074571 Vimu10g00799 10 7072266 7074571 ECH