Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00756 ATGGAGGCAACACAGGAAGAAGCTGCGACAGCATATGACATGGCAGCTATTGAATATCGAGGACTCAACGCTGTCACCAATTTCGACCTTAGCCGCTACATCAAGTGGCTTAAGCCAAACAATAACGATAACACTGTGAACTCTAATGTTCTTGACGCTAACCCTAATTCTGAGACCAACTTTACCCCAAATTCTAATCAACAACAAGGATTCAATTTTTTCCAGAGTCAAGAATCCACGGTGACTCAGCCTCGATCTTCTGGCGCCACGTCAGCCCTAGGACTTTTGCTGCAGTCGTCCAAGTTCAAAGAGATGATGGAGATGACTTCCGCCGCCGATTTGTCGACGGCGGCGTCGGGGTCTGAGTTGGTGCCGTGCACGTTTCCCGATGACATTCAGACGTATTTCGAGTGTGAAGATTCCAACAGATATGGAGAAGGGGATGATAACATGTTCGGCGAGCTCAACGGGTTTGTGCCCCATATGTTCCATTGTGATGACTTTGAGTCTTGA 513 0.4776 MEATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLKPNNNDNTVNSNVLDANPNSETNFTPNSNQQQGFNFFQSQESTVTQPRSSGATSALGLLLQSSKFKEMMEMTSAADLSTAASGSELVPCTFPDDIQTYFECEDSNRYGEGDDNMFGELNGFVPHMFHCDDFES 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00756 170 Gene3D AP2/ERF domain 3 31 IPR036955 GO:0003700|GO:0006355
Vimu10g00756 170 SUPERFAMILY DNA-binding domain 4 31 IPR016177 GO:0003677
Vimu10g00756 170 ProSiteProfiles AP2/ERF domain profile. 1 29 IPR001471 GO:0003700|GO:0006355
Vimu10g00756 170 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00756 Vimu-Chr10 6629480 6631032 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00756 3 159 AP2-EREBP Transcription Factor Family AT1G16060 39.506 5.11e-16 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00756 K09285 - gmx:100804555 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01242 7 11814105 11817111 Vimu10g00756 10 6629480 6631032 PCT