Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00713 ATGGCGTTTGAGCAAACCTCTGTTCCTGGCGGCGATGTTGTGCGGCCACTGAATTCAGTAGCTCGGAGTGTGGCGGAAGAGTCTCTCGTTTTGCCGGTGTCTACGGCGGTTCCTGGCGCGGTGCCGATTTTCTATCCTGCGTCTGTCTCTGATGCTGGCTTGGTTGGAATGGGGTATGGGAATGTGACTTCGGGAGGTGGCGGTGGTGCTGCCACGTGGTGTGTGCGCCCCGCTGTGCCAGTTCATAATCACAATCCCTCTGTGAATCCTGCTGTTGGATTTGTTCATGCTCCTAGTTTTCCCAATAGGGTTGGTGCTGTAGGTGGCAATGCTGTTGATGTTTCAAGTAGTTTTGTGGCTGCTACTCATGGGTTTCCTATGAATTTGGGGGGTAACTGGGTTGCATCGGGTAATGGCCTGGATAGTATTAATAGTAGTGATGTTAATAATAATAATAATAACAACAACAATGCTGTTCCGGGGAACAGCAGAGTCATTAGCAATTCTGGTGATCATGTGTGTAGTATTGGGGTTGGTTCCATTTCCAATACACCTTCAAGCCAGCGGACAGATCAGGCGATTGAGGAGGGTGGGGATGATTCAATTTCAGGGCGGAAAATGAAGTTGATGTGCAGTTATGGTGGGAAGATTTTGCCTAGGCCTAGTGATGGGATGTTGAGATATGTTGGAGGGCAGACAAGAATCATAAGTGTTAAGAGAGATGTGAGTTTTAATGATTTGGTGCAGAAGATGGTTAGTACATTTGGGCAGCATGTGGTTATCAAATATCAGCTCCCTGATGAGGATCTGGATGCATTGGTTTCGGTTTCCTGCCCTGATGATCTGGAGAATATGATGGAGGAGTATGAGAGGTTGATTGAGAGGTCTCCTGACGGTTCTCCCAAGTTAAGGGTCTTTCTTCTTTCTTCAGAACTCGATCCTTCTGGTGTAGCACAGTTTGTAAATTTGCATGATGGTGGACTGAAATATGTTGAAGCTGTGAATGGAATTGCTGATGGGATTGGTGGCAAACTAACAAGGAAAGCGAGTTATACAAGCGCAGTATCTACTCAGAATTCTGATTTTAGCGGGATAGATGCTCTTGATAGCTTGAATGCTGCTCAAGGGGATGTCAGTGGGGTACCTGTACCTATGCCCAGTTCTTTATCACCTGAGGGGAACGTGGCTGCTTCTCATGATGGTACCTTAAATTCTGTGGTTCCTGAGCCTGGTACATCTTACACAGAGGCCTCTGCGGTTCGACCGGGCATTCCTGTAACTAATTATGTTCCAACTCACATTCCACCTCTCCAGAATGAGGTTGAGTTAGAAAAGTCTGTACCTGTTACTTTTTCTCAGACTCAATTTGGGTTACAACAATCTGGTTTGGAAATTCCACCTTCTACACCTTTGCAAACTTCTTTTGATCATCGCCAGGAGGTTATGAACCATGCAGATTATGTCCAGCGTCCTCCCCATATGGGATTCCTGAATCCTCAATTTCTAGGTAAGCCTGGATCCATCTACTCCCAACATCAATTTCATGATAATACTTCTCGTTTTGGGTCCCATCAGGTAATCCCTGCAGTGCAAATGACCATGACTCAGCCATTTTCTCATGCTGCTTTAAGACCCAGTGTTATTCAACCACAAGCATTCATGCAACCTCAGCAAAACCGTTTGGACCAATATAATGATGAAAATGCTTCAGGGCTAAGGATTCACCAGGTTCCTGCTGAACAAAGTTACAATACATTTCAGGTTCAAGTCCCTTTTGGAGGTAATTATGGCTGGGTCCAGGTTCCTTCTGCAGAGCATGTGATCTTTTCTGATGCATTTGTACCTCAACAACCAATGATGATCCCTGAGAAACTCCAACGAGTGGAGGACTGTTATATGTGTCAGAAAAAGCTGCCTCATGCACATTCAGATCCTGTGGTTCAGGATCAGCGAAATAGCTGTGCTGGTCCAATTTCTGATTCAATCCAAAGTTTCTATAGTCTCCCTACGGAGGACAATTCTAGGGCTCAAGCAACAAACATGGTTTTGGTGTCTGCACCAATGAAGGATGACAATGTTGAACAAGTAGTTGTGACAAGACCCAAGGTCCTTAGCAAATTGGATACTCCAGCTGGAGCAGCTTGTACAGACACAACTGGTCTTTCTCTGGAGCTTGAAAGTGAGACGGCTTTTATACAAAAGCTGGACAGGTCTGATCATCCCAGGAATGCAGTTGTCCAGGAAGCAGTTGTAAGAACAGGAGAAAAACAGTTTCCAAGTGATGGGCTGATGGGAACAGCACCGCATTCTTATCGTGATGATATCACCCGCCAGCATATGGTGCCACTTGATAGCAGGTCTAAAGAGGATGCTCTTGTGAATAAACCTGTTACTAATGATATACCTTTAGTTGGTGGCACATCTGTTGAAAATTCTGACTGTATGGTTCAAGAGTGTCCAACAGAATATACAAATGAACTTTGTAGCACTACTTCAAAAGCAGATGCCATGGAGAATTGGATTGCACAAGATCTTCTCAAACCTATTGATGGAAGAATAGACAACCTGAAAATAGGTAATCCTGAAAATTTTCTAAATAATGATAAATTTGATTACAGCACTCAACATGTTGCAGAGAAGAAAGGGGTCCCTCTAGATAACAATTTTGGGAAGTCAAAGTTGATCACTGATGCTGATCAAATTAATATGATAGATTTGCTTCCTAGTTCTACTGTGGAAATTTCATATGGGAATAATTCCAGGCCAGTGGAATATAATGAGGTTATACAAACCCCTGTTTGGGGCATACCTGGATCAAATCCTCAGCCAAAGAGTGGAAACCATCACAGGGAGGATGCAGTTTTATCTTCAGGTCCTCCATCTGCTAGATTTGGAGAGGTGAAGGATTCTTCAAACTCACTTTTTAGCAATCAAGATCTATGGAATATACACAGTTCATACTTTCCACCTCCGAGACCTAACAAAGTTGCATTGAAGAAAGAAACCTATTCAAATAAGGATCAAGTTGGTGAGAATCTTGGCATCAACGGGGAACAAAATCTAGAAGCTCAAATAGACAATGGCCTCTATCAAACACTCCAACAGAATTTAACTTTCGAAGAAGCTCGATCTGTCGCCAAGGTCTCATCAGAAGACCGTCAACTTCAAGCCGTTGCTGAAGGTTTAGCTGCTTCCGTTCTGCACTCAAGCACTTCTTCAAATATTGATTTGAATGTCAAAGATGTGTCCCATCACGAGGACATTGGCGATGGAGATGTTCAAAATAATCTAATAGATATACAGCATAAAGATAAAATTCAGGATCTCAAAAGCAAGCTCCCAGAGAAATTAAATTTTGGCTTTCCAGCATCAGATGTTGGAGCTTTGCAGATTATAAAAAATTGTGACCTTGAAGAGCTGATAGAGTTGGGTTCTGGGACCTTTGGGACTGTATATCATGGAAAATGGAGGGGCACTGATGTGGCAATAAAGCGGATTAATGATAGGTGTTTTGCAGGAAAGCATTCGGAGCAAGAGCGCCTGAGAGCAGACTTTTGGAATGAGGCAATTAAGCTTGCTGACTTGCATCATCCAAATGTGGTAGCATTCTATGGTGTTGTGCTTGATGGCCCCGGAGGTTCTGTGGCAACAGTGACGGAGTATATGGTTAATGGTTCTCTAAGAAATGCGTTGCAGAAGAATGGGAGGTTAAGGGTGTTTAGTGACAGAACTGCCCGGTTTTGCGTGACAAGGAGAGAGTGTGATGGATTGAAGTCTGGGAATCATGAGTATTTGGAGAAGGTTAACCAAATGAAAGGGGGTGGGGGTTTGTGTCTTGGTATTGGGAGGTTTGGTTTTGAGCATAGGACGAATCTTGACAAGCGCAAGCGGCTGTTGATTGCGATGGATGTGGCCTTTGGCATGGAGTACTTGCATGGAAAAAATATAGTACACTTTGACTTGAAAAGTGACAACTTGCTCGTGAATCTCCGAGATCCACATCGTCCAATATGCAAGGTTGGTGACTTGGGTCTGTCCAAAGTGAAATGCCAGACTTTAATATCCGGCGGAGTTAGAGGAACTCTACCTTGGATGGCCCCAGAACTGCTGAATGGGAGCAGTAGTCTTGTATCAGAGAAGGTTGATGTGTTTTCGTTTGGTATTGTTATGTGGGAACTGCTCACGGGAGAAGAGCCGTATGCTGATTTGCACTATGGGGCCATTATAGGTGGTATAGTAAACAACACTTTAAGACCTCCAGTTCCAGAATCTTGCGATCCAGAATGGAGACTGCTAATGGAGATGTGTTGGTCATCAGAACCATCAGAAAGACCTTCCTTCACTGAGATTGCCAATGGATTACGTTCCATGGCAACCAAGATTTCTCCTAAAGGACAAAATCAACAGCAGCAACCCGCCTCATCTCTGAGTCAAGCGCAGAAATAA 4446 0.4399 MAFEQTSVPGGDVVRPLNSVARSVAEESLVLPVSTAVPGAVPIFYPASVSDAGLVGMGYGNVTSGGGGGAATWCVRPAVPVHNHNPSVNPAVGFVHAPSFPNRVGAVGGNAVDVSSSFVAATHGFPMNLGGNWVASGNGLDSINSSDVNNNNNNNNNAVPGNSRVISNSGDHVCSIGVGSISNTPSSQRTDQAIEEGGDDSISGRKMKLMCSYGGKILPRPSDGMLRYVGGQTRIISVKRDVSFNDLVQKMVSTFGQHVVIKYQLPDEDLDALVSVSCPDDLENMMEEYERLIERSPDGSPKLRVFLLSSELDPSGVAQFVNLHDGGLKYVEAVNGIADGIGGKLTRKASYTSAVSTQNSDFSGIDALDSLNAAQGDVSGVPVPMPSSLSPEGNVAASHDGTLNSVVPEPGTSYTEASAVRPGIPVTNYVPTHIPPLQNEVELEKSVPVTFSQTQFGLQQSGLEIPPSTPLQTSFDHRQEVMNHADYVQRPPHMGFLNPQFLGKPGSIYSQHQFHDNTSRFGSHQVIPAVQMTMTQPFSHAALRPSVIQPQAFMQPQQNRLDQYNDENASGLRIHQVPAEQSYNTFQVQVPFGGNYGWVQVPSAEHVIFSDAFVPQQPMMIPEKLQRVEDCYMCQKKLPHAHSDPVVQDQRNSCAGPISDSIQSFYSLPTEDNSRAQATNMVLVSAPMKDDNVEQVVVTRPKVLSKLDTPAGAACTDTTGLSLELESETAFIQKLDRSDHPRNAVVQEAVVRTGEKQFPSDGLMGTAPHSYRDDITRQHMVPLDSRSKEDALVNKPVTNDIPLVGGTSVENSDCMVQECPTEYTNELCSTTSKADAMENWIAQDLLKPIDGRIDNLKIGNPENFLNNDKFDYSTQHVAEKKGVPLDNNFGKSKLITDADQINMIDLLPSSTVEISYGNNSRPVEYNEVIQTPVWGIPGSNPQPKSGNHHREDAVLSSGPPSARFGEVKDSSNSLFSNQDLWNIHSSYFPPPRPNKVALKKETYSNKDQVGENLGINGEQNLEAQIDNGLYQTLQQNLTFEEARSVAKVSSEDRQLQAVAEGLAASVLHSSTSSNIDLNVKDVSHHEDIGDGDVQNNLIDIQHKDKIQDLKSKLPEKLNFGFPASDVGALQIIKNCDLEELIELGSGTFGTVYHGKWRGTDVAIKRINDRCFAGKHSEQERLRADFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMVNGSLRNALQKNGRLRVFSDRTARFCVTRRECDGLKSGNHEYLEKVNQMKGGGGLCLGIGRFGFEHRTNLDKRKRLLIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWELLTGEEPYADLHYGAIIGGIVNNTLRPPVPESCDPEWRLLMEMCWSSEPSERPSFTEIANGLRSMATKISPKGQNQQQQPASSLSQAQK 1481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00713 1481 CDD STKc_MAP3K-like 1143 1452 - -
Vimu10g00713 1481 MobiDBLite consensus disorder prediction 179 199 - -
Vimu10g00713 1481 Gene3D Transferase(Phosphotransferase) domain 1 1286 1481 - -
Vimu10g00713 1481 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1130 1224 - -
Vimu10g00713 1481 PANTHER SERINE-THREONINE PROTEIN KINASE 263 1455 - -
Vimu10g00713 1481 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1283 1470 - -
Vimu10g00713 1481 ProSitePatterns Protein kinases ATP-binding region signature. 1143 1174 IPR017441 GO:0005524
Vimu10g00713 1481 SUPERFAMILY CAD & PB1 domains 222 311 - -
Vimu10g00713 1481 MobiDBLite consensus disorder prediction 1458 1481 - -
Vimu10g00713 1481 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 226 310 - -
Vimu10g00713 1481 SUPERFAMILY Protein kinase-like (PK-like) 1132 1452 IPR011009 -
Vimu10g00713 1481 SMART serkin_6 1137 1462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu10g00713 1481 CDD PB1_UP2 210 307 - -
Vimu10g00713 1481 SMART PB1_new 221 308 IPR000270 GO:0005515
Vimu10g00713 1481 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1316 1328 IPR008271 GO:0004672|GO:0006468
Vimu10g00713 1481 Gene3D Phosphorylase Kinase; domain 1 1131 1225 - -
Vimu10g00713 1481 MobiDBLite consensus disorder prediction 939 960 - -
Vimu10g00713 1481 Pfam Protein tyrosine and serine/threonine kinase 1142 1452 IPR001245 GO:0004672|GO:0006468
Vimu10g00713 1481 ProSiteProfiles Protein kinase domain profile. 1137 1458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu10g00713 1481 Gene3D - 227 311 - -
Vimu10g00713 1481 Pfam PB1 domain 226 306 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00713 Vimu-Chr10 6194429 6200919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00713 136 680 MAP Kinase Kinase Kinase AT3G46920 37.658 8.24e-82 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Vimu10g00713 PK_Tyr_Ser-Thr 2e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00713 - - gmx:100776264 2227.21