Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00697 ATGATCATGGGAAACCTTAAACCTGCATGGTTGGAAGCTCTCTATGCTCAAAAGTTCTTTGTGGGCTGCTCTTATCATGAGAATGCAAAGAAGAATGACAAGAACATATGCTGCTTAGATTGTTGCACCAGTATTTGTCCCCACTGCTTACCCTCCCATCGCTTCCATACCCTTCTGCAGGTTCGCCGTTATGTATATCATGATGTTGTCAGATTGGAAGATCTTCACAAACTCATAGATTGCTCCAACGTCCAGCCTTATACCATCAATAGTGCCAAGGTGGTGTTCATCAAGAAGAGACCACAAAACCGGCAATTCAAGGGGTCAGGAAACTACTGCACTTCCTGTGATAGAAGTCTCCAAGAACCTTTTATCCATTGCTCTCTCGGATGCAAGGTGGATTTTGTGTTGAAACACTACAAGGACCTCTCTTCCTATTTGAGAACATGCAAGTCAGTGCAACTAAGCTCTGATTTTCTGATTCCACAAGAGATGATGGGTGACGATGAAATGACTCGTTCAACCATTGTGGATTGTGATGAGCCAATGAGTTCATCTTCAGGGTCAGAGAACATGAGCATGGCTTGCACAGAGATTGTAAGGAAGAAGCGTAGTGGGTGGAATGTGTGTGCAAGATCAATGACCAACAAGGTTTCCCATGAAGACATGGCCACTGGTATGAGTAGAAGGAAAGGCATTCCTCATAGATCTCCTTTGTGTTAG 723 0.4398 MIMGNLKPAWLEALYAQKFFVGCSYHENAKKNDKNICCLDCCTSICPHCLPSHRFHTLLQVRRYVYHDVVRLEDLHKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEPFIHCSLGCKVDFVLKHYKDLSSYLRTCKSVQLSSDFLIPQEMMGDDEMTRSTIVDCDEPMSSSSGSENMSMACTEIVRKKRSGWNVCARSMTNKVSHEDMATGMSRRKGIPHRSPLC 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00697 240 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 6 239 - -
Vimu10g00697 240 Pfam PLATZ transcription factor 62 133 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00697 Vimu-Chr10 6012529 6014029 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vimu10g00697 PLATZ 3.5e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00697 - - gmx:100810461 455.677