Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00695 ATGCATGCAAGGCCCTTCTACTGTTTTGTCTTAAACCAAATTAAGAAAGCCTCAGAAATGGAACCTCAGCTCCTCTTTCTCTCTTTCTTCCTTTCAGCACCTCTACTTTACTTCTTACTCGTCCTTTATTTCAACAACCACAACCGCCACCGCCTCCCTCCCTCTCCACGGTGGCGCCTCCCAATACTAGGGCACATGCACCTGTTGGGTCCTCTCATCCACCAATCCCTCCACTCCCTCGCCCTCCAACTCGGACCCTTTTTCTCTCTTCACTTCGCTTCCCTTCCCTGTATCATTGTTTCTTCTCCTCACTACGCCAAACTCGTCCTCCACACCTACCAACACGCATTCATCAACCGCATGGAAACCATCGCCGTCAAACGCCTCACCTACGATTCCTCTCTGGCTTTCGCGCGCTACGGTGAGTACTGGAGGTTCATCAAGAAGCTCAGCATGAACGAGCTTCTGGGCTCACGCAGCATCAACAACTTCCGCCACCTGCGTCAGCAAGAGACACGTGGCTTTCTGAGGGTTCTGGCCCTGAAAGCCAAGGCTGGTCAAGCCGTTAATGTGACGGAGGAGTTGCTTAGGTTGACGAATAACGTTATTTCGAGGATGATGTTGGGTGAAGCAGAGGAGGCACGTGATGTGGTGCGTGGAGTGACAAAGATCTTCGGGGAGTTTAACGTTTCGGATTTCGTTTGGTTGTTGAAAAAATTGGACCTTCAGGGTTTCGGGAAGAGGATAGAGGATTTGTTTGGGAGGTTGGATGCGATGGTGGAAAAGATTATTTACAAACGAGAGGAAATGAGAAGAAAAAGAAAAAGTGTTCAAAATGGAGATTGTGAAGTGAGAGACTTTCTTGATGTTTTACTTGATTGTGTTGAGGATGAAAACTGCCAAGTCAAAATTAACAGGGTTCACGTTAAAGCCCTCATTGTGGATTTTCTGACAGCAGGGACTGATACCACAGCCATCTCAACAGAATATGCATTGGTGGAGCTGATGAAGAACCCTTTGGTGTTAGAAAAAGCTCGAAAAGAGATTGAGAGTGTGGTGGGAAAAAACAAAGTTGTTGAAGAATGTGATTGTGAAAATCTACCTTACCTGAAAGCCATTGTTAAGGAAACATTTCGGCTGCATCCACCAGTGCCCATGGTTAACAGAATATGTGTTGAAGAGTGTAAGATTGAGAATTATGTGATCCCAAAGAACACACTACTGTTTGTGAATGTTTGGTCGATGGGAAGGAACCCAAAGTATTGGGAGAAGGCATTAGAGTTTCGTCCGGAACGGTTCATGATGGTGGGTGAAGGAGGAGATTCGAATGGGGTGATGGATGTAATGGGTCAACATTTTGAACTTCTTCCTTTCGGTTGTGGAAGAAGAATGTGTCCTGGGGTATCTTTAGTGATGCAAGAGGTGCCAGCATTGCTTGGAGCTATCATTCAGTGTTTTGATTTTCAGGTGATGGATTCCAAAGGTTTTAAGGTTGATGGTAGAGCGATTGATATGAATGAGAGGCCAGGATTAACGGCTCCAAGGGCTCAGGACTTGCTTTGTCTTCCACTTCAAAGATCCAATATACATCAAACCACTTAA 1602 0.4588 MHARPFYCFVLNQIKKASEMEPQLLFLSFFLSAPLLYFLLVLYFNNHNRHRLPPSPRWRLPILGHMHLLGPLIHQSLHSLALQLGPFFSLHFASLPCIIVSSPHYAKLVLHTYQHAFINRMETIAVKRLTYDSSLAFARYGEYWRFIKKLSMNELLGSRSINNFRHLRQQETRGFLRVLALKAKAGQAVNVTEELLRLTNNVISRMMLGEAEEARDVVRGVTKIFGEFNVSDFVWLLKKLDLQGFGKRIEDLFGRLDAMVEKIIYKREEMRRKRKSVQNGDCEVRDFLDVLLDCVEDENCQVKINRVHVKALIVDFLTAGTDTTAISTEYALVELMKNPLVLEKARKEIESVVGKNKVVEECDCENLPYLKAIVKETFRLHPPVPMVNRICVEECKIENYVIPKNTLLFVNVWSMGRNPKYWEKALEFRPERFMMVGEGGDSNGVMDVMGQHFELLPFGCGRRMCPGVSLVMQEVPALLGAIIQCFDFQVMDSKGFKVDGRAIDMNERPGLTAPRAQDLLCLPLQRSNIHQTT 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00695 533 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Vimu10g00695 533 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00695 533 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00695 533 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00695 533 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00695 533 Gene3D Cytochrome P450 44 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00695 533 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00695 533 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00695 533 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00695 533 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00695 533 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00695 533 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00695 533 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00695 533 PRINTS E-class P450 group I signature 81 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00695 533 PANTHER STEROID 21-HYDROXYLASE-RELATED 37 516 - -
Vimu10g00695 533 Pfam Cytochrome P450 53 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00695 533 SUPERFAMILY Cytochrome P450 53 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00695 Vimu-Chr10 5968462 5970194 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00695 24 526 Cytochrome P450 AT5G06900 41.473 5.83e-126 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00695 K23179 K24188 ag:BAA22423 686.026