Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00653 ATGTTGGTCGTATCGCCGGACCTTCCTCTCTCTATTCTGACCCTCCGTAGCAGCCATTGTTGTCTTCTCGCCGCAAGCTTCTGCATCACCGAACCTCTCGTTTTTGCGTTCTGGTTTGAGCAGAGACTCATCCGCACTGGTCCTCACATTGATTCATTTGACGTGGAGGCTCTTGAAGTTCCCGGTGCTCACAGAAGTGACTATGAGGACATCAGTATGGGTAAGAAAATTGTATTAGCTATTCAGACGCTTGGTGTTGTCTCTGGTGACGTTGCAACAAGTCCCTTGTATACCTTCAGTGTTATGTTTAGAAAGGCCCTTATTAATGGAAATGAAGACATTCTTGGAGCTTTATCACTTGTCTTGTACACATTAATTTTGATTCCTTTGTTGAAGTATGTCCTGGTGGTTCTGTGGGCCAATGATGATGGTGAAGGTGCTACGTTTGCCTTGTACCCGTTGATCTGTCGTCATGCTAAGGTTAGTCTTCTCCCCAATCAGTTACCATCAAATGCCCGTATATCAAGCTTTAGGCTTAAGGTGCCATCCCCTGAGCTTGAAAGGTCATTAAAAATCAAGGAAAGACTTGAGAATTCTCTGACTCTGAAGAAGATTCTACTAATATTAGTTTTTACTGGTACTTCCATGGTGATTGCTAATGGTGTTGTTACACCGGCTATGTTAGTACTATCATCTGTTGGTGGTTTAAAAGTTGGGGTAGATGCTACCGAGAAAGATGAAGTGTTGATGATTTCAGTTGCCTGCCTTGTCATTTTGTTCAGTGTGCAAAAGTATGAAACAAGTAAAGTGGGACTTGCAATAGGACCTGCTTTGCTCTTATGGTTTTGTTCTCGTGCCTACTATTGGTCGGGCTATGACAACAACAACAAATCTTCATATTTGTCCAAACCCGTTCTCACTAGTTCTTCCACCTTCACGTTTATGTCGTTCAGTTCAGTTGTGAGGGGGAGAAAGTTTAAGCTGTTGCAGGGTATCAACAATTTCACTGTTTCCACCGTTCACAGTGAGGGGGAGTATGTTTCCAAGATACTGCAAGCCAAGTATGGTATTTCAAGCCACATAAGTATGGTAGTCCCTGTAGCCCCATATGTTTCCAAGACACTACAAGTCAAGTATGACAGTTCAAGCCACATAACCACTATAGGCCTCATCACTCCATCAGTCAGTGATGGTAATCCATGTAGTTTTGTAGCTTTCAACCACTATAGGCCCCATCACCCATCCATCTTAGAGTTGGGGATTCAGTCCTTGCAGTTTGTCATTGTCCACCACTGCTCTCCGTCATCCACTTTTGGAGTTTCATAA 1326 0.4344 MLVVSPDLPLSILTLRSSHCCLLAASFCITEPLVFAFWFEQRLIRTGPHIDSFDVEALEVPGAHRSDYEDISMGKKIVLAIQTLGVVSGDVATSPLYTFSVMFRKALINGNEDILGALSLVLYTLILIPLLKYVLVVLWANDDGEGATFALYPLICRHAKVSLLPNQLPSNARISSFRLKVPSPELERSLKIKERLENSLTLKKILLILVFTGTSMVIANGVVTPAMLVLSSVGGLKVGVDATEKDEVLMISVACLVILFSVQKYETSKVGLAIGPALLLWFCSRAYYWSGYDNNNKSSYLSKPVLTSSSTFTFMSFSSVVRGRKFKLLQGINNFTVSTVHSEGEYVSKILQAKYGISSHISMVVPVAPYVSKTLQVKYDSSSHITTIGLITPSVSDGNPCSFVAFNHYRPHHPSILELGIQSLQFVIVHHCSPSSTFGVS 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00653 441 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 74 284 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vimu10g00653 441 Pfam K+ potassium transporter 81 284 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00653 Vimu-Chr10 5572413 5574096 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00653 40 286 Inorganic Solute Cotransporters AT5G09400 76.518 4.93e-105 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00653 - - gmx:100788008 418.698