LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu10g00601	ATGTGTCAACAAATTCAAAGGAGAAAGTCCAGAGCTATAAGAAGATCAATTCGAAAAACAAAGGAGAAGGTGATACCCCTCCACACTGAAGTACACCTCTTAAGCGAAATCAAAGGTGATAACCCTCCAGATGAAGTACACCTCTTAAGCGAAATCAAAGGTGATACCCCTCCACGCGAAGTATACTTCTTAAGTGAAATCAAAGGTGATACCCCTCCACATCGAAGTTCACCTCTTAAGCAAATCAAAGGTGATACCCCTCCACATGAAGTACACCTCTTAAGCGAAATCAAAGGTGACCCCTCCACAGTGATACCCCTCCACAGTGAAGTACACCTCTTAAGCGAAATCAAAGGTGATATCCCTCCACATGAAGTACACTTCTTAAGCAAAATCAAAGGTGATACCCCTCCACACGAAGTACACTTCTTAAGCGAAATCAAATATGGTACCCCTTCCACGAGGTTCATACACCTCTCCAACGAAGTTCACAAGCAAAATCTAAATAAAGAGGGGCAGTTGTCAACACCTAATATCGTCCAGGTAAGACATGTGTTAGTTACGTGGAATTTAATTATTTTAAATTTTAAAAAACTATCTCCTTCTCTCTCCCATTCATCCTCTTCTTCTTTATCCTCTTCCCGCCGTGTTCCTCCACCTTTCCCCGACGCGTCCTTGGAAATTCTTGGGGCGGCTCCCATTGGGAGAAGCGCGTTGCCGAATCTGTGCGCCGCTCTACCTTATCCAGCTTCACTGGTGTTGGGCGGTGAGGTTGAAAAATTGAGGCAACTCGAGGAAAGAGGTGCCCCAAAAGGGAGGGTCGTTGGTGAGAGGTTGGGAGAAGCCCAGATTTGGGGGTTGTCTTATTGGAGGAAGTGGAAAAGTCTATTCGGACTGTCACCTTCTCCTCGTCCTCTTGTTCTTTCTCTGCAAGAGGTAGCGAGAGCTATCTCTCGTGCTGCTGTGGTCAAAGGATTCCAATTAAACCAATATGAGAGGCTTGGTGGTGGTGCCAACACTCTGAGTAAAAGATACTCTAAAGGCCTTGGTTCTGTAACCGAGGCATATACGAACGAGGTAAAAGAAGATAGGTTTTATGCCTCGGTCAGGAAACGAGTGGAAGCCATATGTAAACCTTCAACCCGAGGATTGGCTCTGACGGTAGAGGAACCTGAAACAGAGTGGTGCAAGTCAAAGTGTTTTTCAGTTGATGTTGGAAACTTGGATAAATACGCAACCAGAAAATCCCAACCCGAGATCAAAACAGACCCAAGATTTCCCAACTTCAGAAACCCAATTTGA	1302	0.4516	MCQQIQRRKSRAIRRSIRKTKEKVIPLHTEVHLLSEIKGDNPPDEVHLLSEIKGDTPPREVYFLSEIKGDTPPHRSSPLKQIKGDTPPHEVHLLSEIKGDPSTVIPLHSEVHLLSEIKGDIPPHEVHFLSKIKGDTPPHEVHFLSEIKYGTPSTRFIHLSNEVHKQNLNKEGQLSTPNIVQVRHVLVTWNLIILNFKKLSPSLSHSSSSSLSSSRRVPPPFPDASLEILGAAPIGRSALPNLCAALPYPASLVLGGEVEKLRQLEERGAPKGRVVGERLGEAQIWGLSYWRKWKSLFGLSPSPRPLVLSLQEVARAISRAAVVKGFQLNQYERLGGGANTLSKRYSKGLGSVTEAYTNEVKEDRFYASVRKRVEAICKPSTRGLALTVEEPETEWCKSKCFSVDVGNLDKYATRKSQPEIKTDPRFPNFRNPI	433

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu10g00601	433	MobiDBLite	consensus disorder prediction	68	87	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu10g00601	Vimu-Chr10	5102277	5108279	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu10g00601	240	350	Major Intrinsic Protein MIP	AT3G61430	34.821	8.69e-08	51.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu10g00601	K09872		-	gmx:100809467	59.6918