Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vimu10g00561 | ATGGGGAACATTTATCTGGCACATTTGATGGTGATGGTGGTGGTGGTGCTTTTCCTGGGGGTGTTTTTACCCTGTTTGTGTCAAGGTGATTCAGACTATGATACCACTGCTGTGTATGTTGTTACCCTTAGACATGCTCCTGTTTCTCATTACTATGGTGAGTTGAGAAGAGAAGTTAATAGCTTCAAAGATGCTGCTCCTGCTCCAGGGAGAACCCAATTTAACAAACCAAGAAGGTATGACAATATTACTAAGACAGATAAGAGATATGGCTCTTACATTTCCCAAGTTCATGATTCTCTGTTGAAGAAAGTGTTAAACGGAGAGAAATATTTGAAGCTCTATAGCTACCATTACCTGATAAATGGATTCGCTGTGCTGGTTACCCAGAAACAGGCAGAGAAACTATCAAGGAGCAGTGAAGTGTCCAATGTGGTTTTGGATTTTTCTGTAAGGACTGCGACTACACACACGCCACAGTTTTTGGGTCTGCCACAGGGAGCATGGTTTCAAGAGGGAGGGTTTGAAACAGCTGGAGAAGGAGTTGTTATTGGGTTTGTTGACACTGGCATAGATCCAACACATCCTAGTTTTGGTGATAGTAAATCCAATCATCCATATCCTGTTCCTGGTCATTTTTCTGGCATCTGTGAGGTTACTCGCGACTTTCCATCTGGTTCTTGCAATAGGAAGCTTGTTGGGGCCCGCCACTTTGCTGCTTCAGCCATAACCAGAGGAATATTTAATTCAACTCAGGACTATGCTTCTCCCTTTGATGGTGATGGTCATGGCACGCATACAGCAGCTGTTGCAGCAGGAAACCATGGGATTCCAGTCATTGTTGCTGGACATCACTTTGGAAATGCTAGTGGGATGGCTCCTCGTTCACACATTGCTGTTTACAAGGCATTATACAAGAGCTTTGGAGGATTTGCTGCAGATGTTGTTGCAGCAATTGACCAGGCAGCTCAGGATGGGGTTGACATAATAAGTTTGTCAATTACTCCTAATAGACGTCCTCCTGGTGTGGCAACTTTCTTCAATCCAATAGACATGGCTCTGCTTTCGGCTGTGAAGGCCGGTATTTTTGTCGTGCAAGCAGCAGGAAATACTGGACCATCACCAACAAGCATGTTCTCCTTCAGTCCATGGATCTTTACGGTTGGTGCTGCATCTCATGATCGGGTTTATAGCAACTCCATATTTCTTGGAAATAATGTGACCATACCTGGAGCTGGTCTTGCTCCTGGCACAGATGAAAGCAAACTTTATAAACTGATTCATGCACATCATGCATTGAGCAATGACACAACGGTTGCTGATGATATGTATGTTGGTGAGTGCCAAGATGCAAATAAGTTCAACAAGGATTTGATCAAGGGGAACCTCTTAATGTGCAGCTATTCAATTCGATTTGTGCTGGGACTCTCCACCATCAAAAGAGCCTCAGAAACAGCCAAAAATCTTAGTGCAGCTGGTGTTGTCTTCTATATGGATCCCTATGTGATTGGTTTTCAGCTTAACCCTGTCGCAATGAAAATGCCAAGCATAATAATTGCTTCCACTAATGATTCCAAGATTTTAATGCAATACTACAATTCTTCATTGGAAATAGATGCAGTTTCAAAGAAAATTGTTAAATTTGGGGCTGTTGCCAGTATCTGTGGTGGACTAAAAGCGAACTATGGCAGTGCTGCACCCAAGGTTATGTATTACTCTGCCAGAGGACCAGATCCAGAAGACAGTCTTCCTCATGAAGCAGACATTTTGAAACCCAACTTGTTAGCTCCTGGAAGTTTTATATGGGCTGCTTGGAGTTCTGGTGCCGCCGATTCCGTTGAATTCCTAGGTGAGAATTTTGCATTGATGTCTGGCACAAGCATGGCTGCTCCTCATGTTGCTGGTCTTGCTGCACTAATTAAGCAAAAGTTCCCGAGTTTTAGTCCTGCAGCCATTGGATCTGCACTTTCCACTACAGCTTCTCTGTATGACAAGAGTGGTGGGCCAATAATGGCTCAACGATCGTATGCCTCTCCCGAACTGAACGAGTCTCCAGCAACTCCTTTTGACATGGGAAGTGGTTTTGTGAATGCAAGTGGAGCACTGAATCCTGGTTTGATTTTTGATTCCGTTCCTTTGCCCTTTGAAGCTGTTGAGTTTATGTGGGGTTATGATGATTATATGTCATTTCTATGTGGCATCAATGGTTCAGCTCCTGTGGTGCTAAACTACACTGGTCAAGATTGTGGACTCTTCAATTCCACTGTGTATGGTCCTGATCTGAACCTGCCCTCAATCACTATATCAAAGCTGAACCAATCTAGAATAGTGCAGAGGACAGTCCAAAACACTGCTCAAAATGAATCATACAGTGTTGGTTGGACTGCTCCTTATGGAGTTTCATTGAAAGTGTCTCCAACTCACTTCAGTATTGGCAGTGGTGAGAAGCAGATATTGTCTGTGCTCTTGAATGCAACAGTTAACAGCTCTGTTTCCAGCTTTGGGAGAATTGGGCTGTTTGGGAATCAAGGTCATGTGCTAAACATTCCAATTTCAATCATGGTTAAAATCTCATCTAACACCACTACAAGTTAA | 2595 | 0.4343 | MGNIYLAHLMVMVVVVLFLGVFLPCLCQGDSDYDTTAVYVVTLRHAPVSHYYGELRREVNSFKDAAPAPGRTQFNKPRRYDNITKTDKRYGSYISQVHDSLLKKVLNGEKYLKLYSYHYLINGFAVLVTQKQAEKLSRSSEVSNVVLDFSVRTATTHTPQFLGLPQGAWFQEGGFETAGEGVVIGFVDTGIDPTHPSFGDSKSNHPYPVPGHFSGICEVTRDFPSGSCNRKLVGARHFAASAITRGIFNSTQDYASPFDGDGHGTHTAAVAAGNHGIPVIVAGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQAAQDGVDIISLSITPNRRPPGVATFFNPIDMALLSAVKAGIFVVQAAGNTGPSPTSMFSFSPWIFTVGAASHDRVYSNSIFLGNNVTIPGAGLAPGTDESKLYKLIHAHHALSNDTTVADDMYVGECQDANKFNKDLIKGNLLMCSYSIRFVLGLSTIKRASETAKNLSAAGVVFYMDPYVIGFQLNPVAMKMPSIIIASTNDSKILMQYYNSSLEIDAVSKKIVKFGAVASICGGLKANYGSAAPKVMYYSARGPDPEDSLPHEADILKPNLLAPGSFIWAAWSSGAADSVEFLGENFALMSGTSMAAPHVAGLAALIKQKFPSFSPAAIGSALSTTASLYDKSGGPIMAQRSYASPELNESPATPFDMGSGFVNASGALNPGLIFDSVPLPFEAVEFMWGYDDYMSFLCGINGSAPVVLNYTGQDCGLFNSTVYGPDLNLPSITISKLNQSRIVQRTVQNTAQNESYSVGWTAPYGVSLKVSPTHFSIGSGEKQILSVLLNATVNSSVSSFGRIGLFGNQGHVLNIPISIMVKISSNTTTS | 864 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vimu10g00561 | 864 | SUPERFAMILY | Subtilisin-like | 154 | 706 | IPR036852 | GO:0004252|GO:0006508 | |
| Vimu10g00561 | 864 | Gene3D | - | 394 | 562 | - | - | |
| Vimu10g00561 | 864 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 625 | 635 | IPR023828 | - | |
| Vimu10g00561 | 864 | CDD | PA_subtilisin_like | 403 | 535 | - | - | |
| Vimu10g00561 | 864 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 107 | 851 | IPR045051 | - | |
| Vimu10g00561 | 864 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 26 | 152 | IPR037045 | - | |
| Vimu10g00561 | 864 | Pfam | Subtilase family | 179 | 664 | IPR000209 | GO:0006508|GO:0008236 | |
| Vimu10g00561 | 864 | PRINTS | Subtilisin serine protease family (S8) signature | 179 | 198 | IPR015500 | - | |
| Vimu10g00561 | 864 | PRINTS | Subtilisin serine protease family (S8) signature | 259 | 272 | IPR015500 | - | |
| Vimu10g00561 | 864 | PRINTS | Subtilisin serine protease family (S8) signature | 624 | 640 | IPR015500 | - |
Showing 1 to 10 of 17 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vimu10g00561 | - | - | gmx:100796456 | 1531.54 |
Showing 1 to 1 of 1 entries