Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00518 ATGCAACTCCAAATCTCACTCTCAATGCTTCTACTCTCCTTTTTCTTAACATCTCCCACGCTTTTCACCACCGCAGCACAGAGCAAGCCGCAGGATCTACTCCGATCCTCCTGCGTCCACTCACGCTACCCGCGTCTGTGCCTGCGCACCCTCTCGCACTACCCGGGGCCTGCCAACACGCCCCTGGACATGGCTCGAGCCGCGCTCAGGGTCAGCCTGGCCCACACTCGCCGGACCTCCAAGTTCCTGCACACGCTGTCTAAAGGCGGCGCAGCTGCGATGAGCAAGCGCCAGCGCTCCGCTCTCCGCGACTGCACAGAGCAGATCTCGGACTCCGTGGACCAGCTCCGACGGAGCCTCGACGAGTTACAGCACCTACGCGCAGAGACCTTCCGCTGGCAAATGAGCAACGCACAGACGTGGGTGAGCGCCGCCCTCACCGACGGCGACACGTGCCTCGACGGCTTCGCCGGCAATGCCAGGCCCGACTTAAAACGCAGAGTCACCGACGTTGCCAGGGTCACCAGCAATGCTCTGTATATGATAAATCGGCTCGGTCAAAGTAGGACCGGAAAGTCGAAGCCCAGGCCCAAGCCCAAGCACAGGCCTGATTCTCTGAAAGAATTGAATTGA 633 0.6051 MQLQISLSMLLLSFFLTSPTLFTTAAQSKPQDLLRSSCVHSRYPRLCLRTLSHYPGPANTPLDMARAALRVSLAHTRRTSKFLHTLSKGGAAAMSKRQRSALRDCTEQISDSVDQLRRSLDELQHLRAETFRWQMSNAQTWVSAALTDGDTCLDGFAGNARPDLKRRVTDVARVTSNALYMINRLGQSRTGKSKPRPKPKHRPDSLKELN 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00518 210 SMART PMEI_2 29 181 IPR006501 GO:0004857
Vimu10g00518 210 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 185 IPR035513 -
Vimu10g00518 210 CDD PMEI-like_3 36 185 - -
Vimu10g00518 210 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 186 IPR035513 -
Vimu10g00518 210 MobiDBLite consensus disorder prediction 184 210 - -
Vimu10g00518 210 FunFam Pectinesterase inhibitor 3 29 186 - -
Vimu10g00518 210 Pfam Plant invertase/pectin methylesterase inhibitor 33 180 IPR006501 GO:0004857
Vimu10g00518 210 Coils Coil 106 126 - -
Vimu10g00518 210 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 180 - -
Vimu10g00518 210 NCBIfam pectinesterase inhibitor domain 7 185 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00518 Vimu-Chr10 4132937 4133569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00518 33 210 Carbohydrate Esterase AT3G14310 30.688 1.00e-17 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00518 - - gmx:100816686 330.872