Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00515 ATGACCATTTCGCCCTTCTCTCTCCCTTTTAATACCAAGGAACACAACACCTATTCACGTTCTCACAAACCCATTCTCAAAAGTCATACCATAACAACGACAACATCATCATTCTCGAAGCTCCAAAATTCAACCATGTCCAAAGGAGGAAAACTAACGAAGCTGAAGTCAGTGCTCAAGAAATGGAACTCCTTCAGCAGCAAACAGACCCAAGCCACCATCACCTCCGTAGCCAGCGACGGTGACTCCTCGTCGCTCCGCCCCGTGTACGTCGGGAAGACGCGGCGGCAGTACCTGGTGAGCGCGGAGGTTGTCGGACACCCGCTGTTCCGGGAGCTGGTGGACAGGTCCCGCGACAGCAGCTCGGAGGAGGAGGAGGACAGCATCAACGTGGCGTGCGAGGTCGTTCTGTTCGAACACTTGCTCTGGATGCTTCACAACGCCGATCCTCAACCTGAGTCGCTGGACGAACTCGCCGATTTTTACGCCTGCTGA 495 0.5434 MTISPFSLPFNTKEHNTYSRSHKPILKSHTITTTTSSFSKLQNSTMSKGGKLTKLKSVLKKWNSFSSKQTQATITSVASDGDSSSLRPVYVGKTRRQYLVSAEVVGHPLFRELVDRSRDSSSEEEEDSINVACEVVLFEHLLWMLHNADPQPESLDELADFYAC 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00515 164 Pfam Auxin responsive protein 55 145 IPR003676 GO:0009733
Vimu10g00515 164 PANTHER EXPRESSED PROTEIN 57 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00515 Vimu-Chr10 4096853 4097347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00515 47 145 Calmodulin-binding Proteins AT4G34750 28.846 5.84e-08 47.8