Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu10g00497 | ATGAACGAACCAGAATTGGAACTCCTTCCCCTCTTTCCTTTACTTCTCACACTTCAAGGGCAAAGAAATGAACAGCTCTTCTTCTTCTTCGTCTGCTGCTGTTTTTATCGCACGCTCTCGGCATCCAAGTCCATGACACTGCAATTTCTTCTCCTTCTGCTCTCTCTACTCGCTGTTGCTTCTCATGGACTCGCTTCCAATGCTACACTGAACGAGACTTGTAGATACTTCGATGGTTCTCTCAGTAGAGATACAAAAGTACCTTGCCCTATTGGTTGGGTTATGGACCCTAACAAGACCAAGTGCTTTCTTCATGTTGGGAGGCCTCAATCTTGGAATGACTCAGAAATCTGTTGTAGTAAGTATGGTGGACATTTAGCTTCATTGACATCACTTCAGGAGCTACAATTTGCTCAGAGCCTCTGTGGTGAATCTGTGAATAGTTGCTGGATTGGTGGACAAAGACGCAACACCACAACTGGTTATCAGTGGATGTGGTCTGACAATTCACCAGGGAATAACTCCATATTTCCATTGGAAACTGTTCCGCCCCATTGTAACGGAACTGGATTATCCTGTCATAGAAACAATACAGATAATCTGTGCACGGTAATGACTAATAATTCAAACTCTCTCGTGAGTGAGAGATGCGATAATCCTCACTCTTCTCTGTGTATACTTGATATAGATGCAGCGTGTAACCGGATGCACTGCCATAGGGATTATTACCTTATCATCCTCATAGTAGTGAGTGCATTGATACTCTCCACAACATTAGCAGTGGTAGTTTGGCTTCTTGTATATAAACGGGGCAAGAAAAGAAGGCGGTCTAGAAAAATATCTGTTCCAGGAGCTTCTCTTCCATCATGGAAAGTCTTCACCAAAGAGGAATTAAGGTCAATTACGAAGAATTTCAGTGAAGGTAATCGTCTTGTTGGTGATACCAAGACTGGTGGTACATACAGTGGGGTTTTATCAGATGGTTCGAGGGTTGCAGTTAAGAGATTGAAGAGGACAAGCTTTCAGAGGAAAAAAGAGTTTTATTCTGAAATTAGCAGGGTTGCTAGGCTTCGATATCCCAATCTGGTTGCTGTGATGGGATGCTGCTATGATCATGGTGATCGCTACATTGTCTATGAGTTTGTAGCTAATGGTCCCTTAGATAAATGGCTGCATCACATACCTAGGGGAGGTCGTAGCTTAGATTGGGCTATGAGGATGAAAATTGCTACAACGCTTGCTCAAGGAATTGCGTTTCTGCATGACAAGGTTAAGCCACAAGTGGTGCATCGAGATATACGTGCAAGTAATGTACTCCTGGATGAGGAGTTTGGAGCACGCCTGATGGGTGTTGGTCTGTCCAAGATTGTGCCATACGAAGTAATGCATGAGAGAACTGTCATGGCAGGTGGAACTTACGGATATCTTGCTCCAGAGTTTGTGTATAGGAACGAGTTTACAACGAAGAGTGACGTATATAGTTTTGGCGTCCTACTACTTGAAATAGTAAGCGGACGTAGACCTACACAGGCAGTTGATTCCGTTGGTTGGCAGAGTATCTTTGAGTGGGCAACACCTCTTGTGCAAGTTCATCGCTACCATGAACTCTTGGATCCTCATATAACTTCATCCTCTTCTAGCATCATCCCAGAGGCTAGTACCATCCAAAAGGTGGTTGACCTTGTTTATTCCTGCACGCAGCATGTTCCTTCTATGCGCCCTAGAATGTCTCATGTTGTTCACCAGCTGCAACAGATTGCCCAACCACCTGCAAAGTAA | 1779 | 0.4401 | MNEPELELLPLFPLLLTLQGQRNEQLFFFFVCCCFYRTLSASKSMTLQFLLLLLSLLAVASHGLASNATLNETCRYFDGSLSRDTKVPCPIGWVMDPNKTKCFLHVGRPQSWNDSEICCSKYGGHLASLTSLQELQFAQSLCGESVNSCWIGGQRRNTTTGYQWMWSDNSPGNNSIFPLETVPPHCNGTGLSCHRNNTDNLCTVMTNNSNSLVSERCDNPHSSLCILDIDAACNRMHCHRDYYLIILIVVSALILSTTLAVVVWLLVYKRGKKRRRSRKISVPGASLPSWKVFTKEELRSITKNFSEGNRLVGDTKTGGTYSGVLSDGSRVAVKRLKRTSFQRKKEFYSEISRVARLRYPNLVAVMGCCYDHGDRYIVYEFVANGPLDKWLHHIPRGGRSLDWAMRMKIATTLAQGIAFLHDKVKPQVVHRDIRASNVLLDEEFGARLMGVGLSKIVPYEVMHERTVMAGGTYGYLAPEFVYRNEFTTKSDVYSFGVLLLEIVSGRRPTQAVDSVGWQSIFEWATPLVQVHRYHELLDPHITSSSSSIIPEASTIQKVVDLVYSCTQHVPSMRPRMSHVVHQLQQIAQPPAK | 592 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu10g00497 | 592 | Pfam | Lectin C-type domain | 109 | 225 | IPR001304 | - | |
Vimu10g00497 | 592 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 125 | 587 | - | - | |
Vimu10g00497 | 592 | ProSiteProfiles | Protein kinase domain profile. | 306 | 584 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu10g00497 | 592 | ProSiteProfiles | C-type lectin domain profile. | 98 | 226 | IPR001304 | - | |
Vimu10g00497 | 592 | FunFam | C-type lectin receptor-like tyrosine-protein kinase At1g52310 | 382 | 592 | - | - | |
Vimu10g00497 | 592 | CDD | CLECT | 101 | 225 | - | - | |
Vimu10g00497 | 592 | SUPERFAMILY | C-type lectin-like | 88 | 225 | IPR016187 | - | |
Vimu10g00497 | 592 | Gene3D | Transferase(Phosphotransferase) domain 1 | 382 | 591 | - | - | |
Vimu10g00497 | 592 | SUPERFAMILY | Protein kinase-like (PK-like) | 279 | 584 | IPR011009 | - | |
Vimu10g00497 | 592 | Pfam | Protein tyrosine and serine/threonine kinase | 316 | 583 | IPR001245 | GO:0004672|GO:0006468 | |
Vimu10g00497 | 592 | SMART | CLECT_2 | 89 | 226 | IPR001304 | - | |
Vimu10g00497 | 592 | FunFam | C-type lectin receptor-like tyrosine-protein kinase | 283 | 381 | - | - | |
Vimu10g00497 | 592 | Gene3D | Phosphorylase Kinase; domain 1 | 283 | 381 | - | - | |
Vimu10g00497 | 592 | Gene3D | - | 62 | 228 | IPR016186 | - | |
Vimu10g00497 | 592 | SMART | tyrkin_6 | 315 | 583 | IPR020635 | GO:0004713|GO:0006468 | |
Vimu10g00497 | 592 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 428 | 440 | IPR008266 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu10g00497 | Vimu-Chr10 | 3890761 | 3895773 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu10g00497 | 119 | 589 | Receptor kinase-like Gene Family | AT1G52310 | 69.583 | 0.0 | 647 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_C-LEC | Vimu10g00497 | PK_Tyr_Ser-Thr | 8.7e-41 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu10g00497 | - | - | vra:106762676 | 1067.37 |