Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00469 ATGGGTGCCCTTTTCACCTTCGTTTTCTCGCTCTTGCTTCTGGCACAATGCTGCTGGTGTCTAACATCGCCCAAGAAGACATACATTGTTCACATGAAACACAACAACAAGCCTTCAATCTACCCCACTCACACCGACTGGTACACCGCAAATCTTCAATCTTTAACCACCGATTCCGATCCCTTGCTTTACTCTTATACTCATGCCTACAACGGCTTTGCGGCGTCGCTGGCCGAGGACCAGGCGCAGGACCTTCTCAGATCCGAGGATGTTCTTGGAGTGTACGAGGAGACGGTCTACCAACTGCACACCACGCGTACGCCGCAGTTTTTGGGGCTCGAGAGAGAGACGGGGCTGTGGGAGGGTCACACCGCGCAGGACCTCAACCAAGCGTCGCACGATGTTATCGTGGGGGTGCTGGACACAGGTGTGTGGCCTGAATCTCCAAGCTTTACTGACGTCGGTATGCCTGAAATTCCGGCCCGGTGGCGCGGGGAGTGCGAGACCGGGGCAGATTTCTCGCCGAGTTTGTGCAACAAGAAGCTCATCGGCGCGAGAAGCTTCTCCCGAGGGTTCCACATGGCCTCTGGGGTTGGGTCCAGGGAGAAGGAGCCGGCGTCGGCGCGCGACAGGGACGGGCACGGTACCCACACCGCGAGTACAGCGGCTGGGTCGCACGTGGGGAACGCTAGTCTCCTTGGTTACGCCAGTGGGACCGCACGTGGGATGGCACCGACGGCGCGTGTAGCGGTTTACAAAGTCTGCTGGACCGACGGCTGCTTTGCGTCAGACATTCTCGCCGGGATGGACCACGCCATCCAGGATGGCGTCGACGTGCTCTCGCTCTCCCTCGGCGGCGGCTCCGCGCCGTACTTTCGCGACACCATTGCTGTAGGCGCGTTCGCAGCGGTGGCAAGGGGGATCTTCGTCTCCTGCTCCGCCGGGAACAGCGGCCCCGAGAAGGCCTCACTTGCAAATGTTGCACCCTGGATAATGACCGTTGGTGCTGGGACTTTGGACCGTGATTTCCCCGCCTTCGCCGTTCTCGGCAACAAAAAACGGTACTCCGGTGTTTCGCTTTACAGCGGAACCGGAATGGGGACCAAACCGGTGGGGTTGGTTTATAATAAAGGGTTGAACCAGTCCGGAAGCGTCTGCATGCCCGGTTCACTCGACCCGAGTTTGGTTCGTGGGAAGGTGGTGGTTTGCGATAGAGGGATTAACGCGCGCGTGGAGAAGGGCAAGGTGGTGCGTGACGCAGGTGGGGTGGGGATGATTCTGGCGAACACAGAAGCGAGTGGGGAGGAGTTAGTAGCGGACAGCCACCTTCTACCGGCTGTGGCGGTGGGGAGAATCGTGGGGGATCAGATCAGGAAATACGCTTCCTCAGATCCTAATCCAACGGCAGTTCTCGGTTTCCGAGGAACGGTTTTGAACGTTAGACCTTCACCAGTGGTGGCAGCGTTTAGTTCAAGAGGGCCCAACATGGTGACCCGACAGATTCTGAAACCGGATGTTATTGGGCCTGGGGTTAACATCTTAGCCGGGTGGTCCGAAGCTATTGGGCCCTCTGGGTTGAAGGATGACACGCGGAAGACGCAGTTCAACATCATGTCAGGTACGTCGATGTCTTGTCCACACATAAGCGGGTTGGCTGCGTTGCTGAAAGCAGCGCATCCAGAATGGAGTCCCAGCGCTATAAAATCTGCACTCATGACCACAGCGTACGTTCACGACAACACCAAGTCCCCACTTCGCGACGCCGCAGGTGGTGCGTTTTCCACGCCGTTGGCTCACGGTGCGGGCCACGTTAACCCACACAGGGCCCTTTCTCCTGGGCTTGTCTACGACGCCTCCACCAGTGACTACATTAAGTTCCTCTGCTCCTTGGACTACACCCCCGACCACATTCAACTCATAGTTAAGCGCCACGCCGTTAATTGCACCAGAAAATTCTCTGACCCTGGCCAATTGAACTACCCCTCCTTCTCAATCCTCTTCGGAGCCAAGAGGGTGGTGAGGTACACGCGCACCCTGACCAACGTGGGCGAGGCTGACTCCATTTACGATGTCACCGTTGACGCCCCCTCGACGGTGGAGGTGAGGGTGAAGCCCGCCAGGCTTGTGTTTGGGAAGGTGGGTGAAAGGCGGAGGTACACGGTGACCTTTGTGTCGAAGAAGAGTGGCGGTGATTCCGGCAAGTATGGTTTCGGAAGCATCATGTGGAGCAACGCGCAGCACCAAGTGAGAAGCCCAGTTGCTTTTTCTTGGACTCTCTTGTGA 2283 0.5769 MGALFTFVFSLLLLAQCCWCLTSPKKTYIVHMKHNNKPSIYPTHTDWYTANLQSLTTDSDPLLYSYTHAYNGFAASLAEDQAQDLLRSEDVLGVYEETVYQLHTTRTPQFLGLERETGLWEGHTAQDLNQASHDVIVGVLDTGVWPESPSFTDVGMPEIPARWRGECETGADFSPSLCNKKLIGARSFSRGFHMASGVGSREKEPASARDRDGHGTHTASTAAGSHVGNASLLGYASGTARGMAPTARVAVYKVCWTDGCFASDILAGMDHAIQDGVDVLSLSLGGGSAPYFRDTIAVGAFAAVARGIFVSCSAGNSGPEKASLANVAPWIMTVGAGTLDRDFPAFAVLGNKKRYSGVSLYSGTGMGTKPVGLVYNKGLNQSGSVCMPGSLDPSLVRGKVVVCDRGINARVEKGKVVRDAGGVGMILANTEASGEELVADSHLLPAVAVGRIVGDQIRKYASSDPNPTAVLGFRGTVLNVRPSPVVAAFSSRGPNMVTRQILKPDVIGPGVNILAGWSEAIGPSGLKDDTRKTQFNIMSGTSMSCPHISGLAALLKAAHPEWSPSAIKSALMTTAYVHDNTKSPLRDAAGGAFSTPLAHGAGHVNPHRALSPGLVYDASTSDYIKFLCSLDYTPDHIQLIVKRHAVNCTRKFSDPGQLNYPSFSILFGAKRVVRYTRTLTNVGEADSIYDVTVDAPSTVEVRVKPARLVFGKVGERRRYTVTFVSKKSGGDSGKYGFGSIMWSNAQHQVRSPVAFSWTLL 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00469 760 Gene3D - 340 478 - -
Vimu10g00469 760 SUPERFAMILY Protease propeptides/inhibitors 25 101 - -
Vimu10g00469 760 FunFam subtilisin-like protease SBT1.5 340 478 - -
Vimu10g00469 760 Gene3D - 627 757 - -
Vimu10g00469 760 CDD Peptidases_S8_3 100 576 IPR034197 -
Vimu10g00469 760 ProSitePatterns Serine proteases, subtilase family, serine active site. 540 550 IPR023828 -
Vimu10g00469 760 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 103 IPR037045 -
Vimu10g00469 760 Pfam Subtilase family 133 579 IPR000209 GO:0006508|GO:0008236
Vimu10g00469 760 Pfam Peptidase inhibitor I9 27 103 IPR010259 -
Vimu10g00469 760 SUPERFAMILY Subtilisin-like 102 614 IPR036852 GO:0004252|GO:0006508
Vimu10g00469 760 ProSiteProfiles Serine proteases, subtilase domain profile. 110 610 - -
Vimu10g00469 760 PRINTS Subtilisin serine protease family (S8) signature 210 223 IPR015500 -
Vimu10g00469 760 PRINTS Subtilisin serine protease family (S8) signature 539 555 IPR015500 -
Vimu10g00469 760 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Vimu10g00469 760 FunFam Subtilisin-like protease SBT1.9 19 103 - -
Vimu10g00469 760 CDD PA_subtilisin_like 348 469 - -
Vimu10g00469 760 Pfam Fibronectin type-III domain 657 754 IPR041469 -
Vimu10g00469 760 FunFam Subtilisin-like protease SBT1.5 627 758 - -
Vimu10g00469 760 Pfam PA domain 394 457 IPR003137 -
Vimu10g00469 760 MobiDBLite consensus disorder prediction 196 223 - -
Vimu10g00469 760 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 754 IPR045051 -
Vimu10g00469 760 FunFam Subtilisin-like protease SBT1.5 134 353 - -
Vimu10g00469 760 Gene3D Peptidase S8/S53 domain 134 623 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00469 Vimu-Chr10 3583698 3587872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00469 22 757 Subtilisin-like Serine Gene Family AT2G05920 69.919 0.0 1055
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00469 - - gmx:100797543 1318.52