Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00467 ATGACCCTCATGAAAAGCATATGGAAATCCATCTTCCCTGGTTGTTACAAGGGTGAGTACCCATCTCCGAAGCCAAAGAAGGTGGTGGCTACAAAGCCAAATTCTTCTCACAGGATTTCTGTGACGGATTTGAGTTATCCAAGCACGACTCTTTCAGAGGATCTCTCCGTTTCTCTGGCGGGGACCAACCTCCATGTTTTCTCACTTGCTGAGCTCAAGATCATCACGCAGTCTTTCTCTTCTAGCAACTTTCTAGGAGAAGGTGGGTTCGGACCAGTGCATAAAGGTTTCATCGATGACAAGCTCAGGCATGGCCTTAAGGCTCAACCTGTGGCTGTTAAGCTCTTGGACTTGGATGGCTCGCAGGGCCACAAAGAGTGGTTGGTAAGTACTTTTTTTTTCCTCATAAATTTGTGA 417 0.4676 MTLMKSIWKSIFPGCYKGEYPSPKPKKVVATKPNSSHRISVTDLSYPSTTLSEDLSVSLAGTNLHVFSLAELKIITQSFSSSNFLGEGGFGPVHKGFIDDKLRHGLKAQPVAVKLLDLDGSQGHKEWLVSTFFFLINL 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00467 138 PANTHER OS01G0588500 PROTEIN-RELATED 44 130 - -
Vimu10g00467 138 Gene3D Phosphorylase Kinase; domain 1 48 134 - -
Vimu10g00467 138 SUPERFAMILY Protein kinase-like (PK-like) 45 128 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00467 Vimu-Chr10 3566290 3566706 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00467 61 127 Trihelix Transcription Factor Family AT1G26150 44.776 2.80e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00467 - - gmx:100783759 259.996