Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00463 ATGGATTCAAAATTTTCTCCCATAAAGAAGAATAGTATTAATAATGATTATAGTATGAAGAAGAAGGAAGAACTCTCTATGCAGCTTTCATCTCCACCCATTTCCAAGCCATCGGATGAAGAATTGGGTCGAGTAAATAGGTTTGAGTTTGGGCAATTTGTTGCAAGAGAAGCTGTGCTTGATGAAGAGTATTGGATGATGAGTGCAAATGATTTTCCTTATGTTTTATCCAGATATGTTGATAACTACAAAAAGAAATTTGCTGAGCAGGAATTTCATGCATTAAAGAGACGGTGCAAGGTGCAAAACGGTGATAACTGCGCATGCATCATCACGGTGAGGAAGGAGCAGAAAAATGCAAAACACTCAATATTAAAAAGTGTTGTGGGAACCCTTGATTTGAACATCCGATATTTGCTTCAAGGGGAGACTTACCCTGGGGAACGGGTAAAGGCTCCCATTTTCTGCTGCATCAACAGAACACCACCAAACAGATATGGATACATTGCAAACCTGTGCGTTATCAAATCAGCTCGGCGCCAGGGAATTGCAAGCAACATGTTGTCTTTTGCTATTGGAGCTGCAAAATCTAATGCAGGTGTGACACAAGTGTATGTGCATGTGGACAAAAATAATAGTCCTGCACAAATATTGTACCAAAAGATGGGTTTTGAGGTAATATTGCTAGTTCATGTTCATTTTTCACCGTCTACATTGGATCGAATAAGTCACTAA 735 0.3932 MDSKFSPIKKNSINNDYSMKKKEELSMQLSSPPISKPSDEELGRVNRFEFGQFVAREAVLDEEYWMMSANDFPYVLSRYVDNYKKKFAEQEFHALKRRCKVQNGDNCACIITVRKEQKNAKHSILKSVVGTLDLNIRYLLQGETYPGERVKAPIFCCINRTPPNRYGYIANLCVIKSARRQGIASNMLSFAIGAAKSNAGVTQVYVHVDKNNSPAQILYQKMGFEVILLVHVHFSPSTLDRISH 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00463 244 CDD NAT_SF 155 207 - -
Vimu10g00463 244 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 155 227 IPR016181 -
Vimu10g00463 244 Pfam Acetyltransferase (GNAT) family 102 224 IPR000182 GO:0016747
Vimu10g00463 244 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 111 244 IPR000182 GO:0016747
Vimu10g00463 244 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 17 228 - -
Vimu10g00463 244 Gene3D - 73 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00463 Vimu-Chr10 3506603 3508243 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vimu10g00463 Acetyltransf_1 1.9e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00463 - - gsj:114388633 372.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00463 10 3506603 3508243 Vimu10g00463 10 3506603 3508243 ECH
Vimu7g01500 7 14201954 14208496 Vimu10g00463 10 3506603 3508243 PCT