Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00429 ATGGAGGAAATAACTTCGACGGTTGCAGTGCCATTCGCACTTGGGAATTTAATACAAAAAGATCCATCAGTGACAACCCACATGGAGATAACTGGCCTAAAGCTCAGGGCAAACACTGCACCAGTATTAATATTAAATCCTGCTATTGAAAGTGAAAATCACACAGATAGTGGTCCTCAACCCCAAATTAAAGTGTCTTCAGAAGCAAAGAACAACCTTGTCTCAGAAATGGTAAGTCAAGGAGACAGTAATTGTTTCCATGCTGAAAACCTAAAGCAGGCAAGAAAAGAAAACCAATCATTGTTAGCTAAGGATTTTAAGTGTGATCCTATCTCTCAATCAGCTCCTGCTGACAAAACTAGTCCTTGTAGGGAGGAATCTTCTGTTTCTGTGGCTAATTGTTGTGAAATAAGTTCACCTACCACCTTAAAGGTTGATGATAACACAGTTCATGGAAGGGCAGGTTTGACTGAGCCGCCAGGTGCAGCTATAGAACCACTGCAGAACATGGTTTCTGTTGCTAGGGAACATGAGAGTGAAGATGGAAGTGGGTCAGATGAGTCTGATAAAAAACCATTTTCTGTGGTTCATGAGATGCCAGAGAAGGCAACATGCTTGGAATTGAGTGGTGCTATCAGTACTACCCCACTATGGGGTTGCTCATCGGTTTGTGGAAGGAGAGAGGAGATGGAAGATGCTATTGCTGTTAGGCCTCACCTTTTTCAAGCTCCTTCAATGATGGTAATGGATGATTATGTGAGTGAAAACTCAAACTTTTCACCAGCCCACTTTTTTGGCGTGTATGATGGACATGGGGGCTGTCAGGTATGCCTTAAAACACTTCCTTTCAATTGTATCATCCAAGTTACTCCTTATTCCATTCCATGTCACATGGGGGTGATGTTTTCATAG 912 0.4232 MEEITSTVAVPFALGNLIQKDPSVTTHMEITGLKLRANTAPVLILNPAIESENHTDSGPQPQIKVSSEAKNNLVSEMVSQGDSNCFHAENLKQARKENQSLLAKDFKCDPISQSAPADKTSPCREESSVSVANCCEISSPTTLKVDDNTVHGRAGLTEPPGAAIEPLQNMVSVAREHESEDGSGSDESDKKPFSVVHEMPEKATCLELSGAISTTPLWGCSSVCGRREEMEDAIAVRPHLFQAPSMMVMDDYVSENSNFSPAHFFGVYDGHGGCQVCLKTLPFNCIIQVTPYSIPCHMGVMFS 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00429 303 Gene3D - 211 282 IPR036457 -
Vimu10g00429 303 ProSitePatterns PPM-type phosphatase domain signature. 264 272 IPR000222 GO:0043169
Vimu10g00429 303 SUPERFAMILY PP2C-like 215 276 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00429 Vimu-Chr10 3224863 3225774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00429 216 276 PP2C-type Phosphatase Gene Family AT1G17550 52.381 5.05e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00429 K14497 - gmx:100812974 357.451