Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00415 ATGAATACCCACCTTGGCATTGTAGTGTTGTCTAACATACATGTTGCTTGGTACTACTTTTATGATCAATACACAGAGCAGAGTCGAAGAGATGATTTGGAGTCTCTTGGTTATGTCTTGATGTATTTCCTGAGGGGAAGTCTCCCTTGGCAAGGACTTAAAGCGGGAACCAAGAAACAGAAATACGAGAGAATCAGTGAAAAAAAGGTTTCTACCTCTATTGAGGCATTGTGTCGAGGTTATCCAACAGAGTTTGCATCATACTTCCATTACTGCCGCTCATTAAGGTTTGATGATAGGCCAGATTATGCTTACCTCAAGAGAATATTTCGTGACCTGTTTATTCGTGAAGGATTCCAGTTTGATTATGTGTTTGATTGGACAATTTTGAAGTATCAGCAATCACAGCTAGCCGCACCTCCTGCACGTGCTGTTGGTCCTGCTGCTGGAACTAGTTCTGCAATGCCACCAGCTGTGACTAATGCTGATAGACAAACAGGAGAGGAAGACGGACGACCCCCAGGTCTGATTTCAGGGGATTCCACAAGGAGAAGAATGTCAGGCACCATCTCAAACACTGTAAATATTTCAAGACAGAAAAATCCTGTCACCATGGATGCTGCTCTTAATAAGGAAGCCATGTTATCAAAGCCCAATGTCCTGGGTCAGTCAAGTGGATCAAGGCGAGCGGCTGTTTCCAGTAGCCGGGATGCATTTGCTGGTAGTGATTTGGATTCTCGTACTCGTACTACTGAGGTTAACCCTGGAATGCGCAAAATAACATCTGGGAGAAATGCATCTTCTCATGTCAAGAACTATGAAAGTGCTGTCAAGGGCATTGAAGGTTTGCAATTGGAAAATGACAAGAGGGCACATTATTAA 882 0.4354 MNTHLGIVVLSNIHVAWYYFYDQYTEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYERISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDRPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLAAPPARAVGPAAGTSSAMPPAVTNADRQTGEEDGRPPGLISGDSTRRRMSGTISNTVNISRQKNPVTMDAALNKEAMLSKPNVLGQSSGSRRAAVSSSRDAFAGSDLDSRTRTTEVNPGMRKITSGRNASSHVKNYESAVKGIEGLQLENDKRAHY 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00415 293 MobiDBLite consensus disorder prediction 143 186 - -
Vimu10g00415 293 MobiDBLite consensus disorder prediction 239 270 - -
Vimu10g00415 293 SUPERFAMILY Protein kinase-like (PK-like) 23 127 IPR011009 -
Vimu10g00415 293 MobiDBLite consensus disorder prediction 219 270 - -
Vimu10g00415 293 Gene3D Transferase(Phosphotransferase) domain 1 22 157 - -
Vimu10g00415 293 PANTHER CASEIN KINASE-RELATED 2 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00415 Vimu-Chr10 3129366 3138389 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00415 K02218 - gmx:100786777 469.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00415 10 3129366 3138389 Vimu10g00415 10 3129366 3138389 ECH
Vimu7g01448 7 13770571 13775291 Vimu10g00415 10 3129366 3138389 PCT