Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00388 ATGGAAGATGATGAGGCATGCATCACCAGTCTTAGCCTTGGACTAGGAATGGGGAGCCGTGTCACAAAGAAGGAGAAGCAGAAACTCCCTTGTTTGGACCTAACGTTTCAGATTTCTCCAAAGGGGGAGCAAACCATTCACGTGGATAAACAACGACAACAACATCTTCTTCATGATGATAAGGCAAAAGGGTTGTTATGTTTGAAGCACCCCAGTGAAAATAACAGCCCTGATAGCAGCAACAACAGCAGTAACGGCAGCAGAAAGAAACTGAAGCTTACGAAGGAGCAGTCTGCCACCCTTGAGGATATTTTCAAGCTGCATAGCACTCTTAACCCCGTATTCATTTCTCTCTCTTTCACTTAA 366 0.4481 MEDDEACITSLSLGLGMGSRVTKKEKQKLPCLDLTFQISPKGEQTIHVDKQRQQHLLHDDKAKGLLCLKHPSENNSPDSSNNSSNGSRKKLKLTKEQSATLEDIFKLHSTLNPVFISLSFT 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00388 121 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 10 113 - -
Vimu10g00388 121 MobiDBLite consensus disorder prediction 72 88 - -
Vimu10g00388 121 MobiDBLite consensus disorder prediction 67 93 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00388 76 113 Homeobox Transcription Factor Family AT4G37790 63.158 8.85e-08 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00388 K09338 - vra:106760072 192.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01413 7 13486193 13487313 Vimu10g00388 10 2864543 2864908 PCT