Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00331 ACAAGCTTAGCTCAACTTAATCCTGGTTTCTACAGAAAGACATGCCCCAATGTGGAACGCTTGGTTCGTTCTGCTGTGGAGTTGAAGTTTCAGCAGACCTTTGAAGTGCATTTATCATATTCATTCATTGTTCAATGCTTTTCATTTTCATTGGTATTGCTTGCATCTCCAAATAATAAAGCAGAGAAAGATCACCCTGATGACATTTCTCTAGCTGGGGATGGTTTTGACACAGTGGCTAAAGCCAAGGCAGCTGTTGACAGTGTTCCTCAGTGCAGAAACAAAGTCTCTTGTGCTGATATACTTGCTCTGGCTACCAGAGATGTTGTAAATTTGGCTGGGGGACCATTTTATACAGTTGAATTGGGAAGGCGTGATGGGAGAATATCTACTTTTGCCAGTGTTCAACGTCGTCTTCCTCATCCTCATTTCAATTTACATCAGCTAAATTCCATGTTTGCTTCCAATGGCCTCACTCAAACAGATATGATTGCCTTATCAGGTAACTTCAACACATTCACAAGGTGCACATACTATTGGATTCTCTCACTGTGGTCACTTCTCAAAACGGATATACAATTTCAGCACCAGAAAAGGAATTGA 603 0.4113 TSLAQLNPGFYRKTCPNVERLVRSAVELKFQQTFEVHLSYSFIVQCFSFSLVLLASPNNKAEKDHPDDISLAGDGFDTVAKAKAAVDSVPQCRNKVSCADILALATRDVVNLAGGPFYTVELGRRDGRISTFASVQRRLPHPHFNLHQLNSMFASNGLTQTDMIALSGNFNTFTRCTYYWILSLWSLLKTDIQFQHQKRN 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00331 200 PANTHER - 4 169 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu10g00331 200 Gene3D Peroxidase, domain 2 140 169 - -
Vimu10g00331 200 Pfam Peroxidase 26 168 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu10g00331 200 PRINTS Haem peroxidase superfamily signature 114 126 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu10g00331 200 PRINTS Haem peroxidase superfamily signature 96 113 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu10g00331 200 Gene3D - 9 139 - -
Vimu10g00331 200 SUPERFAMILY Heme-dependent peroxidases 5 196 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vimu10g00331 200 PRINTS Plant peroxidase signature 15 34 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu10g00331 200 PRINTS Plant peroxidase signature 114 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu10g00331 200 PRINTS Plant peroxidase signature 95 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu10g00331 200 PRINTS Plant peroxidase signature 74 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu10g00331 200 PRINTS Plant peroxidase signature 161 173 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu10g00331 200 ProSiteProfiles Plant heme peroxidase family profile. 5 168 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00331 Vimu-Chr10 2275720 2276895 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00331 4 168 Peroxidase AT4G30170 65.882 5.20e-71 217