Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00328 ATGGAGGGTCAACCTGCTAAACGCAGACGTGTATACTCACTTGAACCCAACAAAGTGGAACAAGCAGCGTTTGCTAGAAACTACATGAACTATTTGGTGCCGGCATTGATGAAGATCAAGGAAAGGAATACCTCTTCACAGAACTGTGATATTCAGAATGTTGTCAAGTATGAAGTGGACATGGCAATGGTGCACTCAGCCCAGGGTTTTGCATGGAGCGATGCTCTAAGTGTGAAGCTTCAGAGGAATAGAGCCAATGCAGATAGTGACAGAAGCAGCTTCGGTAACAACGACAAGGCTGGTGAAGGCTCATCAAGGATTTGTGGCCAAAATGGTGAAATGGTGCCATTGAACAACCGTTTCACTTCAAACCCTAGTTTGAAGCCTAGAAATAAAAACAAGAGCATGCCTGAAATGAAAAGGGGTTTGAGAGAAGAAGATGAAGATCAGTTGAAGAGCCTTAGAATGTTGATACCTGGGGGAGAAGAGATGTGTAGTGAACAAATGGTGACTGAGCTACAAAGCTATGTAAGCTGTTTGCAAATGCAGGTGAACATTCTTCAGTGCCTCTCAGAGACACATTGA 585 0.4393 MEGQPAKRRRVYSLEPNKVEQAAFARNYMNYLVPALMKIKERNTSSQNCDIQNVVKYEVDMAMVHSAQGFAWSDALSVKLQRNRANADSDRSSFGNNDKAGEGSSRICGQNGEMVPLNNRFTSNPSLKPRNKNKSMPEMKRGLREEDEDQLKSLRMLIPGGEEMCSEQMVTELQSYVSCLQMQVNILQCLSETH 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00328 194 MobiDBLite consensus disorder prediction 84 148 - -
Vimu10g00328 194 MobiDBLite consensus disorder prediction 111 131 - -
Vimu10g00328 194 MobiDBLite consensus disorder prediction 133 148 - -
Vimu10g00328 194 MobiDBLite consensus disorder prediction 84 104 - -
Vimu10g00328 194 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 22 192 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00328 Vimu-Chr10 2252184 2252768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00328 7 80 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 50.000 9.65e-16 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00328 - - gmx:100527269 283.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01354 7 12907056 12908922 Vimu10g00328 10 2252184 2252768 PCT