Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00288 ATGGCTTCATCTGAGTTTGGTGAAGACGGTGATAGCAGAGGCGGTATGTGGGTTTTGGAACAGAGGATTGACCAGCCGATGGATGAAGAAGCTGAAAAGCTCAAAAACATGTACAGAGAAAAAAAATTTTCTACACTGTTGCTTCTGCGGCTTGCATATCAGAGTCTTGGAGTAGTGTATGGAGATTTGGGCACTTCCCCTTTATACGTTTTCTATAATACATTTCCTCATGGAATTGACAACCAGGAGGATGTGATTGGAGCTCTTTCTTTGATTATATACTCTCTTACTCTGGTGCCTCTGGTCAAATATGTTCTTATTGTATTACGAGCGAATGACAATGGTCAAGGTGGAACATTGGCTCTTTATTCTTTGCTCTGTCGACATGCAAATATTAGAACCATCCCCAACCAGCATCGTACGGATGAAGAGCTGACAACATATAGTCGATCTACCATCCGTGAAAAGTCATTTGCTGCAAAAACCAAGAGATGGTTAGAGGAACAACCTTATATTAAAGATATCATTCTTATTCTGGCCCTTGTTGGTACTTGCATGGTGATTGGAGATGGAATTCTTACCCCAGCTATATCTGTTTTATCTGCGGTTGGTGGCATCAAGGTAAATCACGCAGATTTGAGCAACGAAGTAGTGGTATTGGTTGCTGTTGTTATGCTAGTTGGGTTATTCAGCATGCAACATTACGGTACAGATAGAGTTGGTTGGCTCTTTGCTCCAATTGTCCTTCTTTGGTTTCTCCTAATTGGAGGCATAGGAATCTTCAACATCTGTAAATATGACAGCAGTGTTCTAAAAGCTTTTTCACCACTGTATATATACCGCTATCTAAAACGAGGAGGTAGAGATGGTTGGACTTCCCTTGGTGGAATTTTGCTCAGCATAACTGGGACAGAGGCTCTTTTTGCAGACCTAGCCCACTTTCCAGTCTCTTCTGTACAGATTGCATTTACTCTCCTAGTCTTTCCTTGCCTTCTTTTAGCCTACTCTGGACAAGCTGCATACCTTATGCATAACTTGAATCATTCAAATGATGCGTTTTATCGTTCTATTCCAGACAAAATATACTGGCCAGTATTTGTTGTTGCAACAGCAGCAGCTATAGTTGCAAGTCAGGCTACAATATCCGCAACCTTCTCAATTATCAAGCAAGCCAATGCTCATGGCTGTTTCCCAAGAATAAAAGTTGTACATACATCAAAGAAGTTCCTTGGCCAGATATACATTCCAGACATCAATTGGATCCTTATGATTCTATGCATTGCTGTTACGGCTGGGTTTAAAAATCAGAGTCAAATTGGAAATGCATATGGTACTGCAGTTGTGCTAGTGATGCTGGTTACAACGTTGCTTATGATTTTAATCATGATATTGGTGTGGCGCTGCCATTGGATTCTGGTTGTGGTGTTCACTGGCTTATCACTGATAGTGGAATGCACATACTTCTCTGCAGTACTCTTCAAAGTTGACCAAGGTGGATGGGCTCCCCTTGCAATTGCTGGAGCATTTCTTCTGATCATGTATGTATGGCATTATGGCACAGTGAAACGCTACGAGTTTGAAATGCACAGTAAGGTATCAATGGCATGGATTCTTGGACTTGGACCAAGTTTAGGACTTGTTCGTGTCCCAGGAATAGGGCTGGTATACACAGAGCTTGCAAGTGGAGTACCCCACATATTTTCTCACTTCATCACAAACCTACCAGCTATTCATTCTGTTGTTGTTTTTGTATGTGTGAAGTATCTTCCTGTCTACACTGTCCCAGAAGAAGAAAGGTTCCTTGTGAAGAGGATTGGACCAAAGAACTTCCACATGTTTCGTTGCGTTGCAAGGTACGGATACAAAGATTTGCACAAGAAAGATGAGGACTTTGAGAAAAAGCTTTTCCATAACCTTTTTGTGTTTGTTAAGTTGGAGTCTATGATGGAGGGATGCTCAGATTCAGATGACTACAGTCTATATGAACAGCAAACTGAGATATCAAGAGAAGGTCTACTACTGAACAATAATGCAATCACATCATCAACGAATATGGATCCAACAGTTTCTTCTTTGGATTCTATAGTGTCAGTTACTTCACCATCACACTTGAATGCTACTGTTAGATCCTCTGGTCATGTGAGCAACCAAACTGAGGTTGATGAAGTTGAGTTTTTGAACAGTTGCAGAGATGCTGGGGTGGTTCACATACTCGGAAACACAGTTGTGAGGGCTAGCAGGGATTCAAGATTCTACAAGAAAATAGCTGTGGATTATATATATGCATTTCTCAGGAAGATATGCAGAGAAAATAGTGTGATCTTCAATGTTCCTCATGAGAGTCTCTTAAATGTTGGTCAGGTTTTCTATGTATAG 2376 0.4099 MASSEFGEDGDSRGGMWVLEQRIDQPMDEEAEKLKNMYREKKFSTLLLLRLAYQSLGVVYGDLGTSPLYVFYNTFPHGIDNQEDVIGALSLIIYSLTLVPLVKYVLIVLRANDNGQGGTLALYSLLCRHANIRTIPNQHRTDEELTTYSRSTIREKSFAAKTKRWLEEQPYIKDIILILALVGTCMVIGDGILTPAISVLSAVGGIKVNHADLSNEVVVLVAVVMLVGLFSMQHYGTDRVGWLFAPIVLLWFLLIGGIGIFNICKYDSSVLKAFSPLYIYRYLKRGGRDGWTSLGGILLSITGTEALFADLAHFPVSSVQIAFTLLVFPCLLLAYSGQAAYLMHNLNHSNDAFYRSIPDKIYWPVFVVATAAAIVASQATISATFSIIKQANAHGCFPRIKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVLVMLVTTLLMILIMILVWRCHWILVVVFTGLSLIVECTYFSAVLFKVDQGGWAPLAIAGAFLLIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDEDFEKKLFHNLFVFVKLESMMEGCSDSDDYSLYEQQTEISREGLLLNNNAITSSTNMDPTVSSLDSIVSVTSPSHLNATVRSSGHVSNQTEVDEVEFLNSCRDAGVVHILGNTVVRASRDSRFYKKIAVDYIYAFLRKICRENSVIFNVPHESLLNVGQVFYV 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00288 791 Pfam K+ potassium transporter 53 623 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vimu10g00288 791 NCBIfam potassium uptake protein 51 791 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vimu10g00288 791 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 33 789 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00288 Vimu-Chr10 1853226 1856553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00288 8 791 Inorganic Solute Cotransporters AT2G35060 77.197 0.0 1207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00288 K03549 - gmx:100796449 1433.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00288 10 1853226 1856553 Vimu10g00288 10 1853226 1856553 ECH