Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00265 ATGGCTACTAGCACAAGAGACAACGATGAGGCCGAACCTCAAAGAGGATATTGGAGATGGAGCAAACAAGATTTCTTGCCAGAGGAGTCCTTCCAAAGCTGGAACAAGTACGTTTCTGCCCTCTCACACACATGGATAAGGTTCAAGGATCGTCTCTTCAGCAGATCAGATGATGCCACTGAGACAGAAGAACTCAAGAAACAAAGTGAGCATGACATGAAACGTTGCCTCAACTGGTGGGATCTCATATGGTTCGGTTTTGGTTCAGTGATTGGAGCAGGAATCTTTGTGCTCACTGGTCAAGAGGCTCATGACCATGCTGGAGCAGCAATTATTTTATCCTATGTTGCCTCAGGCTTCTCAGCAATGCTTTCTGCTTTCTGCTACACTGAGTTTGCTGTAGAAGTCCCATCAGCGGGAGGGTCATTTGCTTATCTGAGAGTTGAATTAGGAGACTTTGTTGCTTTCATAACAGCTGGCAACATTCTTCTTGGAAGTGTTATTGCAAGTGCAGCAGTGGCCAGATCATGGACTTCTTACTTCACAAACCTTTTGAACCGTCCAGAAAATTCCCTGCGCATTAAAACAAATCTCAAAGAGGAGTACAACTTGTTGGACCCTATAGCTTCTGGGGTTCTGGTGATTGCTTCAGTGATCACAATAATCAGCACAAGAAAAACTTCATTTCTCAATTGGATAGCTTCTGCCATTAACACTGCTGTTATTATATTTGTGATTGTTGCCGGGTTTATTCATGCAGACACATCAAATTTGTCACCCTTTTTACCTTATGGGGCTAAGGGGGTGTTTCAAGCTGCAGCAATTATTTATTTTGCATACGGAGGATTTGACAATATTGCAACCATGGCTGAGGAAACCAAGAATCCATCAAGGGACATTCCTATAGGTTTGGTTGGGTCAATGTCCATGATCACAGTGATTTATTGCCTGATGGCGCTCTCGCTGAGTATGATGCAGAAATACACAGCAATAGACACTGGTGCTGCATTCTCAGTTGCATTTCAGCATGTGGGGATGAAGTGGGCAAAGTATGTGGTGGCTTTTGGAGCCCTGCAGGGAATGACTGCAGTGCTTCTGGTGGGGAGATTGGCACAGGCACGTTATATTACTCACATTGCACGATGCCGCATGATCCCACCATGGTTTGCTCTTGTGCACCATAAGACCGGAACCCCAATAAATGCTACATTGTTGATCACCATTGCAAGTGTCATCATAGCTTTTTTCACAGGCTTGAAGGTGCTGTCAAGCTTGATATCTGTGAGCACACTCTTCGTCTTCATGATGATATCTATTGCCCTTCTGGTGAGGAGGTACTACGTCAGAGGGGTCACACCAAGGGAGAACCTGTTAAAGCTAGTTATCTTCTTGGGGCTTATCATTGCTTCTTCAATGGGAATTTCAGCCTACTGGGGGCTGAGGCCTAATGGTTGGTTTGGATACACTATGACTGTTCCTGTTTGGTTCTTGGCAACTCTAGGGATGTCATTGTTTTTGACTCAGCAGAGGGAGCCAAGAGTTTGGGGGGTTCCACTTGTCCCATGGTTGCCATCTTTGTCAATTGCAACAAATGTGTTCCTGATGGGGTCTTTGGAGTATGAAGCCTTCATAAGCTTTGGAGCGTGCACAGTGGTAATGCTGATCTACTATTTTCTCTTTGGACTCCATGCAACTTATGATATGGCTCACCAACAAGAAAAGCTGCAATCAAAAGTTTATCACAGAGAAACCATCAAGAATGAAGGGCCATAG 1773 0.4467 MATSTRDNDEAEPQRGYWRWSKQDFLPEESFQSWNKYVSALSHTWIRFKDRLFSRSDDATETEELKKQSEHDMKRCLNWWDLIWFGFGSVIGAGIFVLTGQEAHDHAGAAIILSYVASGFSAMLSAFCYTEFAVEVPSAGGSFAYLRVELGDFVAFITAGNILLGSVIASAAVARSWTSYFTNLLNRPENSLRIKTNLKEEYNLLDPIASGVLVIASVITIISTRKTSFLNWIASAINTAVIIFVIVAGFIHADTSNLSPFLPYGAKGVFQAAAIIYFAYGGFDNIATMAEETKNPSRDIPIGLVGSMSMITVIYCLMALSLSMMQKYTAIDTGAAFSVAFQHVGMKWAKYVVAFGALQGMTAVLLVGRLAQARYITHIARCRMIPPWFALVHHKTGTPINATLLITIASVIIAFFTGLKVLSSLISVSTLFVFMMISIALLVRRYYVRGVTPRENLLKLVIFLGLIIASSMGISAYWGLRPNGWFGYTMTVPVWFLATLGMSLFLTQQREPRVWGVPLVPWLPSLSIATNVFLMGSLEYEAFISFGACTVVMLIYYFLFGLHATYDMAHQQEKLQSKVYHRETIKNEGP 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00265 590 Pfam C-terminus of AA_permease 515 564 IPR029485 -
Vimu10g00265 590 Gene3D Amino acid/polyamine transporter I 71 499 - -
Vimu10g00265 590 Pfam Amino acid permease 77 472 IPR002293 GO:0016020|GO:0022857|GO:0055085
Vimu10g00265 590 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 61 566 - -
Vimu10g00265 590 FunFam Cationic amino acid transporter 5 71 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00265 Vimu-Chr10 1634051 1635823 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00265 10 572 Organic Solute Cotransporters AT2G34960 73.759 0.0 864
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00265 - - gmx:100797541 1059.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00265 10 1634051 1635823 Vimu10g00265 10 1634051 1635823 ECH