Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00247 ATGGAAACACTTCCATTGTTAACATACTCTCTCTTCTTCCTCCTTTCTCTTATCATCATTTTCAAACTTTTCTTCCAAACAAAGCACAAAAACCTTCCACCAGGTCCACCACCTCTTCCAATAATCGGCAACCTTAACCTCCTCCAACGCCCCCTCCACCGTTTTCTCCAACGCATGTCCCAAACACACGGCCACATCTTCTCCCTCTGGTTCGGTTCCCGTCTCGCCGTCATCGTTTCATCCCCCTCCGCCTTCCAAGAATGTTTCACCAAAAACGACGTCGCCTTGGCCAACCGACCTCGCTCCCTCTCCGGAAAGCACATCTTCTACAACTACACCACCGTGGGCTCCTGCTCCTACGGCGAGCTCTGGCGCAACCTCCGCCGCATCACCTCCCTCGACGTTCTCTCCACGCAGCGCATCCATTCCTTCGCCGGAATCCGCAAGGACGAAACCGATAGGGTGATCCAGGCCCTGGCCAAGGCCTCCCGCATGGAGTACGCGCACGTGGAGATGAGTTCCATGTTCCACGACATGACTTATAACAGCATGATGAGAATGCTTTCGGGGAAGAGATACTACGGAAAGGAGATTCAGGCGAAGGATTTGGTGAAGGCGAAGGAGTTCAGAGAGACGGTGGAGGAGTTGCTGCAACTGGCGGGAGTGTCAAACAAGGCAGATTATTTGCCCTTCCTTCGGTGGTTCGATTTTCAGAATCTGGAGAAGAAGCTGAAGAGTATTAACAAGAGATTCGATACGTTCTTGGATGAACTCATTCACGAGCAACGCAACAAGAAGGAGAGGGAGAATACCATGATAGATCATCTTCTCACTCTGCAGGAATCACAGCCTCAATATTACAGTGATCATATCATCAAAGGCCTTGTTCTGGCAATGCTGTTCGCGGGCACAGATTCTTCTGCTGTTACATTAGAATGGTCACTGTCAAATTTATTAAACCAGCCAGAAATGTTGAAAAAAGCAAGAGATGAATTGGACTTTCACGTCGGAAAAGATCGCTTGGTAAACGAGTCAGACCTTCCAAAACTGACGTACCTTAAGAAGATAATCCTGGAAACACTGAGGTTGCACCCTCCTGCTCCACTGGCAATCCCACACGTGTCCTCGGAAGACGTCATCATTGAAGGATTCAACGTTCCACGAGACACCATAGTGATGGCTAACATCTGGGCCATGCACAGAGACCCTGCCATGTGGACCGAAGCGACAAGTTTCAAACCGGAGAGGTTTGATGAAGAGGGATCGGAGAAAAAGGTGATTGCTTTTGGAATGGGAAGAAGGGCTTGCCCAGGAGAAGGTTTGGCTCTGCAAAACGTTGGATTAACTTTGGGATTGTTGATTCAGTGCTTTGATTGGAAACGAGTGAATGAGGATGAGATCGATATGAGAGAGGCAAACTGGTTCACCTTGTCGAGATTAACTCCATTGAATGCCATGTGTAAAGCTCGACCACTTGTTAACGATATTAGCTTCAACTAA 1500 0.486 METLPLLTYSLFFLLSLIIIFKLFFQTKHKNLPPGPPPLPIIGNLNLLQRPLHRFLQRMSQTHGHIFSLWFGSRLAVIVSSPSAFQECFTKNDVALANRPRSLSGKHIFYNYTTVGSCSYGELWRNLRRITSLDVLSTQRIHSFAGIRKDETDRVIQALAKASRMEYAHVEMSSMFHDMTYNSMMRMLSGKRYYGKEIQAKDLVKAKEFRETVEELLQLAGVSNKADYLPFLRWFDFQNLEKKLKSINKRFDTFLDELIHEQRNKKERENTMIDHLLTLQESQPQYYSDHIIKGLVLAMLFAGTDSSAVTLEWSLSNLLNQPEMLKKARDELDFHVGKDRLVNESDLPKLTYLKKIILETLRLHPPAPLAIPHVSSEDVIIEGFNVPRDTIVMANIWAMHRDPAMWTEATSFKPERFDEEGSEKKVIAFGMGRRACPGEGLALQNVGLTLGLLIQCFDWKRVNEDEIDMREANWFTLSRLTPLNAMCKARPLVNDISFN 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00247 499 SUPERFAMILY Cytochrome P450 33 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00247 499 Gene3D Cytochrome P450 24 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00247 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Vimu10g00247 499 CDD CYP81 64 483 - -
Vimu10g00247 499 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00247 499 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00247 499 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00247 499 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00247 499 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00247 499 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00247 499 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00247 499 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00247 499 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00247 499 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00247 499 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00247 499 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00247 499 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g00247 499 PANTHER CYTOCHROME P450 82C3-RELATED 13 490 - -
Vimu10g00247 499 FunFam Cytochrome P450 family protein 24 493 - -
Vimu10g00247 499 Coils Coil 237 257 - -
Vimu10g00247 499 Pfam Cytochrome P450 33 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00247 Vimu-Chr10 1539760 1541444 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00247 12 496 Cytochrome P450 AT4G37340 51.633 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00247 K13260 - gmx:100790507 830.091