Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00202 ATCGTGTCCCTCCTAGTTCCTCCTCTACCGCACTCCTCTTCGTTCGTCGTCTTCTCTGAGATTTTTGTGAAGGAGTTTTCTAACGTTCAACCAAAGATGCAGAACGAGGAAGGACAGATCACTGAGCTTTACATCCCTAGGAAGTGTTCTGCCACAAACAGATTGATTACTGCGAAAGACCATGCTTCGGTTCAGATTAACATTGGGCATGTGGATGAGAATGGTATCTACAATGGCCAATTCTCCACCTTTGCTCTTTGCGGCTTCATCCGTGCTCAGGTCTCCATTTTCACTTCTTTTGGAATTGATTTATTGCTTATTATTATTATTATTATTATTATTACTATTCTATTTACAAATATTTGTGTGAACCGTGACCTAGTTATTTTTTTTTGTTTATGCCAGTGGATGGAATTTTTTGTATTTTTTGCAACGTACTCTTTGTTTTTGGAATATAGCATTAGTTCTGTGATTAAGACTATTGTAAATTAG 492 0.374 IVSLLVPPLPHSSSFVVFSEIFVKEFSNVQPKMQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGHVDENGIYNGQFSTFALCGFIRAQVSIFTSFGIDLLLIIIIIIIITILFTNICVNRDLVIFFCLCQWMEFFVFFATYSLFLEYSISSVIKTIVN 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00202 163 PANTHER 40S RIBOSOMAL PROTEIN S21 33 96 IPR001931 GO:0003735|GO:0005840|GO:0006412
Vimu10g00202 163 FunFam 40S ribosomal protein S21 33 98 - -
Vimu10g00202 163 Pfam Ribosomal protein S21e 33 93 IPR001931 GO:0003735|GO:0005840|GO:0006412
Vimu10g00202 163 ProSitePatterns Ribosomal protein S21e signature. 43 51 IPR018279 GO:0003735|GO:0005840|GO:0006412
Vimu10g00202 163 Gene3D - 29 101 IPR038579 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00202 33 105 Cytoplasmic Ribosomal Protein Gene Family AT5G27700 75.342 2.14e-38 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00202 K02971 - qsa:O6P43_021738 129.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00202 10 1222058 1222772 Vimu10g00202 10 1222058 1222772 ECH