Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00158 ATGGGACAAGAATCAGATCACAAAACCCAGTTAGTGTTGGAGATTTGCTCCATTTCCACACGTTCACTTGCCTGTGTTCATACACTTCTCTCAAACCACCCTTCTAAGCCACCTTTCATAGATTGGTATTGCATTCTTGGAGTGGAAGAAAATGCAGGGTTGGTCACCATCCGCCAGCAATACCATAAACTTGCCCTGCAACTTCATCCGGACAAGAACAAACATCCAAAGGCTGAAATTGCTTTCAAACTTATATCTGAGGCATATATGTGTCTGTCTGATGCTGCAAAAAGGAAAGGTTTTGACTCAAAAAGATCAAAAAATTTCTGCTTTGAGTGCAATGGAATTCCATATACATCTAAAAAGGTCCCTTTCCCTGGCAATTCCAATGGGTCGACACGATCTTACAAAGTTCGGAGAAATATTAAAGAGATGAGAGAAATGTTAAAGGAGGAGGCTAATGTTATAGAGAAGTGTCTGCGAGCAAATTTGATGTCAAAGAAAGAGTCTCCACTGTACAATCCTGCAGATTACAGACATGGAAGCAGATTCCTGCATAAAGTTGAGAGAGAAGTTCCGGTTTTCAATCCAATGAAATACTTGTACCAAGGATATCCTCATCTCAGAGATCATGTTCATCACAATTGGGAGACATGTTGGTGCTTTGATACACGAAATCTTGTGCAGAATCACAAGAGAGAAGCTAAGTATGGCTCTCCAGTGTTTGAGGTCAGATCACAGAATAAATTTCCTTATCAGCCATCATGA 768 0.4049 MGQESDHKTQLVLEICSISTRSLACVHTLLSNHPSKPPFIDWYCILGVEENAGLVTIRQQYHKLALQLHPDKNKHPKAEIAFKLISEAYMCLSDAAKRKGFDSKRSKNFCFECNGIPYTSKKVPFPGNSNGSTRSYKVRRNIKEMREMLKEEANVIEKCLRANLMSKKESPLYNPADYRHGSRFLHKVEREVPVFNPMKYLYQGYPHLRDHVHHNWETCWCFDTRNLVQNHKREAKYGSPVFEVRSQNKFPYQPS 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00158 255 Pfam DnaJ domain 41 102 IPR001623 -
Vimu10g00158 255 CDD DnaJ 41 94 IPR001623 -
Vimu10g00158 255 PANTHER BNAC03G44070D PROTEIN 8 220 - -
Vimu10g00158 255 Gene3D DnaJ domain 40 156 IPR036869 -
Vimu10g00158 255 SUPERFAMILY Chaperone J-domain 31 105 IPR036869 -
Vimu10g00158 255 SMART dnaj_3 40 97 IPR001623 -
Vimu10g00158 255 ProSiteProfiles dnaJ domain profile. 41 105 IPR001623 -
Vimu10g00158 255 PRINTS DnaJ domain signature 61 76 IPR001623 -
Vimu10g00158 255 PRINTS DnaJ domain signature 43 61 IPR001623 -
Vimu10g00158 255 PRINTS DnaJ domain signature 77 97 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00158 Vimu-Chr10 911293 912317 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00158 23 103 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 40.000 8.52e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00158 - - gmx:100778573 387.882