Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00132 ATGAGTGGTGTATCAGAAAACCCTATTCATGACAGTACTGAAGGTAAGGCTTCTTCTTCTTCTTCATCAACAACGTTGAAACTCTTTGGTTTTCCATTAACCCCACCAGGTTACAGAGAGATTCACGTGGTGGCAGCAAGCACCGCTGTTTCTCCTCCTCATTGCCCTTACAAGAGATTCAGGTGCCACTTCTGCTACCGTGAATTCGCCAATTCACAAGCTCTCGGTGGCCACCAAAACGCTCACAAGAGAGAACGCCAGAAAGCTGCTCTCTCGCCCTTCGGTTACTTTCGCTACCATCAACGGCTCGTACCACCGGGTCATTCTCCGATCGTGGTTCCGCACGGAGGATCAAGGCCGTTGGTTGGTCCACGTGACCGGGCTCAGCGACCGTGGCTCTCGTGGAACACTGATGAGAGAGGTTATCATAGGGTTGGGTTAGTGAGGCCAATGGGTGCAAGTGCAATTAGCATTGGTACAGTGAGGGAAGTACATAATATTATTGATGATGACGATGGTGATGGAGATGGTGATGGTGATGTTGATGGTAATGGTAATGGTGGTGTTGATCTTAACTTGAGTTTGGCTAACAATACAGCTTTCAATTTTAGGGACAAGGAATTTGGCAGGTGTAAGAGAAGTTGA 645 0.4806 MSGVSENPIHDSTEGKASSSSSSTTLKLFGFPLTPPGYREIHVVAASTAVSPPHCPYKRFRCHFCYREFANSQALGGHQNAHKRERQKAALSPFGYFRYHQRLVPPGHSPIVVPHGGSRPLVGPRDRAQRPWLSWNTDERGYHRVGLVRPMGASAISIGTVREVHNIIDDDDGDGDGDGDVDGNGNGGVDLNLSLANNTAFNFRDKEFGRCKRS 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00132 214 ProSiteProfiles Zinc finger C2H2 type domain profile. 60 87 IPR013087 -
Vimu10g00132 214 MobiDBLite consensus disorder prediction 1 23 - -
Vimu10g00132 214 SUPERFAMILY beta-beta-alpha zinc fingers 58 87 IPR036236 -
Vimu10g00132 214 ProSitePatterns Zinc finger C2H2 type domain signature. 62 82 IPR013087 -
Vimu10g00132 214 PANTHER ZINC FINGER PROTEIN 5 15 94 IPR044299 GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00132 Vimu-Chr10 771255 771899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00132 58 100 C2H2 Transcription Factor Family AT3G58070 65.116 6.54e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00132 - - vun:114162545 322.013