Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00122 ATGAGAAAAACGCTAAAAGGTTTCGTCTCAATATATATAAATAAACAAAGTAATCTCTCAACAACCCTAGCCGGCTCATCTGTGCAAGCACTTTCTCTTTGGTTCGTACGTTCATTCGACTTTCCGTCACAACGTTTTTCTAATTCTGTGTTTCGCAATTTGTTCTGCCGCTTTTCATATCTGATTCTGCATTTTCTGATTGTAGAGATGGCGAAGTCTAAGAATCACACAGCTCATAACCAGTCCTACAAGGCCCACAAAAATGGCATCAAGAAGCCCAAGAGGCATCGCCACACTTCCACC 303 0.4158 MRKTLKGFVSIYINKQSNLSTTLAGSSVQALSLWFVRSFDFPSQRFSNSVFRNLFCRFSYLILHFLIVEMAKSKNHTAHNQSYKAHKNGIKKPKRHRHTST 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00122 101 Gene3D - 70 101 - -
Vimu10g00122 101 Pfam Ribosomal L29e protein family 72 101 IPR002673 GO:0003735|GO:0005840|GO:0006412
Vimu10g00122 101 MobiDBLite consensus disorder prediction 76 101 - -
Vimu10g00122 101 PANTHER 60S RIBOSOMAL PROTEIN L29 70 101 IPR002673 GO:0003735|GO:0005840|GO:0006412
Vimu10g00122 101 MobiDBLite consensus disorder prediction 79 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00122 Vimu-Chr10 683735 684047 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00122 70 101 Cytoplasmic Ribosomal Protein Gene Family AT3G06700 90.625 3.60e-15 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00122 K02905 - twl:119997923 72.4034