Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00073 ATGAAAGAGAAAAATCAACCTCATTCATTGAGATTTGACAATAAGAGAATTGTACAGTGGATACTTCATGATTGGAGTGATGAACATTGTGTGAAGCTGTTGAAGAACTGCTATGATGGAATTCCTGATGATGGAAAGGTGATAGTAATGGAAGCAGTTCTTCCAACAACACCTGAGACTAACAGTGCTGTTTATAAGGCAATTTTAGAATTGGATGTTGCGATGATGACTCAAAATCCGGGAGGGAAAGAGCGATGTGAGCAAGAGTTCATGGATTTGCAACTGCAGCTGGATTTAGTGGCATTAGATATGAATGTCGTGCAAACATTTTCTCAGTTATGGAGTTCTTCAAGTAAGCCACACCATCTGTTTGCTTTTATGCATTTCGAATCAACAGAACAACCTCATGCTGTGTGTAATGTATTATGTTATGTGGACTCTTTCAGATTAATCAAATCAAATCAGATATTAACGTATCTAATTTAA 486 0.3683 MKEKNQPHSLRFDNKRIVQWILHDWSDEHCVKLLKNCYDGIPDDGKVIVMEAVLPTTPETNSAVYKAILELDVAMMTQNPGGKERCEQEFMDLQLQLDLVALDMNVVQTFSQLWSSSSKPHHLFAFMHFESTEQPHAVCNVLCYVDSFRLIKSNQILTYLI 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00073 161 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 17 99 IPR029063 -
Vimu10g00073 161 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 118 IPR016461 GO:0008168
Vimu10g00073 161 Gene3D Vaccinia Virus protein VP39 17 94 IPR029063 -
Vimu10g00073 161 PANTHER O-METHYLTRANSFERASE 17 93 IPR016461 GO:0008168
Vimu10g00073 161 Pfam O-methyltransferase domain 17 93 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00073 Vimu-Chr10 437053 437816 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00073 18 90 Monolignol Biosynthesis Gene Families AT5G54160 57.534 6.57e-26 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00073 K13066 - gmx:100803633 124.02