Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00071 ATGGCTGTGACTGAGCTGAAAGATGCAATTCGGGAGGGGGGTATTCCATTCAACAGGGCGTATGGCACCCATGCTTTTGAGTATCCAAGGTTGGACTCAAGGTTCAATAAAGTTTTCAACACAGCAATGATCAATCACACGACTTTGGTGATGAAGAGGGTTCTGGAATCCTACAAAGGTTTTGAGGGCATAAAAAGGCTGGTGGATGTCGGTGGTGGTCTTGGGATCAACATTAACTTGATCACTTCAAAATACCCTCATATCCATGGCATCAATTTCGACCTGCCTCACGTCATTCAAGATGCTCCTTCCTATCCTGGTATTATCCATACACATTCTAACCCTGTGGTTGTGGAAAGTTCAAAAAAAACAAAAAAGTTCTTTTCCACCTTTTAA 396 0.4268 MAVTELKDAIREGGIPFNRAYGTHAFEYPRLDSRFNKVFNTAMINHTTLVMKRVLESYKGFEGIKRLVDVGGGLGININLITSKYPHIHGINFDLPHVIQDAPSYPGIIHTHSNPVVVESSKKTKKFFSTF 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00071 131 PANTHER O-METHYLTRANSFERASE 6 108 IPR016461 GO:0008168
Vimu10g00071 131 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 5 111 IPR029063 -
Vimu10g00071 131 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 131 IPR016461 GO:0008168
Vimu10g00071 131 Pfam O-methyltransferase domain 5 105 IPR001077 GO:0008171
Vimu10g00071 131 Gene3D - 18 54 IPR036388 -
Vimu10g00071 131 Gene3D Vaccinia Virus protein VP39 36 113 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00071 Vimu-Chr10 430302 430960 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00071 6 110 Monolignol Biosynthesis Gene Families AT5G54160 67.619 1.82e-49 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00071 K13066 - gmx:100803633 185.652