Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00070 ATGGAAAACCTTCCAAATTCAAAGCTGAACGGCGAAGAGAAGAAGAAGGAAGCAGAAGAAATAGAAGATGAAGAAAGCTTCTCGCGTGCCATGCAGCTTGTGAGCTCCGTGGTACTACCGATGGCACTGCAATCGGCGACGGAGCTGGGTGTGTTCGAGGTGCTGAAAGAAGCGGGTGAAGGTGCTAAGCTCTCTGCAAAGGACATAGCCTCCAAGATTTCCTGCACCAACCCAGAAGCAGCCTCAATGCTAGATCGTCTCCTCAATCTTCTTTCCTCTCACTCCATTCTTCACTCTTCTCTCGTTTCCGACAACCTTGTCCCTCCCACATTTCACAGGCTGTACACCATCACTCCCCTGGCCACATTCTTTGCTCGCAATTCTGATGGGGTTTCATTGGGACCCTTGATGACCTTGCTCCAAGACAAAATCTTCCTACACAGCTGGTTAAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAA 492 0.4939 MENLPNSKLNGEEKKKEAEEIEDEESFSRAMQLVSSVVLPMALQSATELGVFEVLKEAGEGAKLSAKDIASKISCTNPEAASMLDRLLNLLSSHSILHSSLVSDNLVPPTFHRLYTITPLATFFARNSDGVSLGPLMTLLQDKIFLHSWLNSLSLSLSLSLSL 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00070 163 Pfam Dimerisation domain 41 91 IPR012967 GO:0046983
Vimu10g00070 163 MobiDBLite consensus disorder prediction 7 23 - -
Vimu10g00070 163 PANTHER O-METHYLTRANSFERASE 30 151 IPR016461 GO:0008168
Vimu10g00070 163 Gene3D - 7 124 IPR036388 -
Vimu10g00070 163 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 31 163 IPR016461 GO:0008168
Vimu10g00070 163 MobiDBLite consensus disorder prediction 1 23 - -
Vimu10g00070 163 FunFam Caffeic acid 3-O-methyltransferase 7 124 - -
Vimu10g00070 163 SUPERFAMILY "Winged helix" DNA-binding domain 22 127 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00070 Vimu-Chr10 429456 429947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00070 20 151 Monolignol Biosynthesis Gene Families AT5G54160 41.667 8.68e-27 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00070 K13066 - gmx:100803633 185.652